Tetrapisispora phaffii: TPHA_0C03520
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Entry
TPHA_0C03520 CDS
T02235
Symbol
TPHA0C03520
Name
(RefSeq) hypothetical protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0C03520 (TPHA0C03520)
03041 Spliceosome [BR:
tpf03041
]
TPHA_0C03520 (TPHA0C03520)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
TPHA_0C03520 (TPHA0C03520)
Spliceosome [BR:
tpf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
TPHA_0C03520 (TPHA0C03520)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
RRM_7
PHM7_cyt
RRM_PARP14_3
DM9
Motif
Other DBs
NCBI-GeneID:
11535193
NCBI-ProteinID:
XP_003684938
UniProt:
G8BQJ2
LinkDB
All DBs
Position
3:764414..765742
Genome browser
AA seq
442 aa
AA seq
DB search
MSEQEHIVEDTVPAEELASSSPASPESIETPVAAESQENQEDENQDRQKDQESVGTAAED
DSDVVPANAINGGRETSDKILYVGNLDKSINEETLKQYFQIGGPISNVKVINDKNNSVNY
AFVEYLQHHDADVAFKNLNGKTIETKVLKINWAFQSQQTTSDESLFNLFVGDLNVDVDDE
TLGHAFSEFPSFVQAHVMWDMQTGRSRGYGFISFSNQEDAQTAMDKMQSTELNGRQIRIN
WASKRENATNGNGNNNNRNMNNRRNNNNSNSNGPRGGFRSYNNNMPPLPMGNMPMSAPPA
GPAVLPPVNPQAVDDMIRRAPLRVTTVYIGNIPHFATEADLIPLLQNFGFILDFKYYPEK
GNCFIKYDTHEQAAVCIVVLANYPFQGRNLKTGWGKEKAVFIPMGQQQGMMMSGMPPPPP
QQQQQFQQDASTPIPNEQQQQQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaagaacatatagtcgaggacaccgtccctgccgaagaattggcttccagt
tctcctgctagtccggaatcaattgagactccggttgctgctgaaagtcaagagaaccaa
gaggatgaaaatcaagaccgacaaaaagaccaagagtcggtgggaaccgccgctgaggac
gattctgatgttgtccctgccaacgctatcaacggtggcagagagacttcagacaagatc
ttatacgttgggaacctggataaatccatcaacgaggaaacgttgaaacaatacttccaa
atcggcggtccaatctcaaacgttaaagtcattaacgataagaacaatagcgtcaactat
gcttttgttgaatatctacaacaccacgatgcagatgtcgcgttcaagaacttgaatggc
aaaaccattgaaaccaaggttttgaaaattaattgggctttccagtctcaacagaccaca
agcgatgaaagtctatttaacttgtttgttggtgatttgaacgttgacgttgatgatgaa
actttgggtcatgccttcagtgaattcccttctttcgtgcaagcccatgttatgtgggat
atgcaaacaggtagatcaagaggttacggtttcatttctttcagtaatcaggaagacgca
caaactgcaatggataaaatgcaatccacagaattgaacggaagacagatcagaatcaac
tgggcttcaaaacgtgaaaacgcaacaaacggtaatggtaataataacaatagaaatatg
aataaccgtcgtaacaataacaacagcaacagcaacggtccaagaggaggtttccgttca
tacaacaacaatatgccacctctaccaatgggtaacatgccaatgagtgctccacctgct
ggtccagcagttctgccaccagtaaacccacaagctgtagatgacatgatcagaagagct
cctttaagagtcaccacagtttacatcggtaacatcccacatttcgctactgaagctgat
ttaattccattattacaaaatttcggttttatcctagattttaaatattatccagaaaag
ggtaactgttttattaaatacgatacgcatgaacaagcagcagtctgtattgtcgtctta
gccaattatccattccaaggtagaaacttaaagacaggctggggtaaagaaaaagctgtt
ttcattccaatgggccaacaacaaggtatgatgatgtcaggtatgccacctccaccacca
caacaacaacaacaatttcaacaagatgcttccacaccaatcccaaatgaacaacaacag
caacaataa
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