Tetrapisispora phaffii: TPHA_0C04140
Help
Entry
TPHA_0C04140 CDS
T02235
Symbol
TPHA0C04140
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03082
ATP-dependent chromatin remodeling
tpf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TPHA_0C04140 (TPHA0C04140)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
TPHA_0C04140 (TPHA0C04140)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tpf01009
]
TPHA_0C04140 (TPHA0C04140)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0C04140 (TPHA0C04140)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0C04140 (TPHA0C04140)
Protein phosphatases and associated proteins [BR:
tpf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TPHA_0C04140 (TPHA0C04140)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TPHA_0C04140 (TPHA0C04140)
SWI/SNF complex
TPHA_0C04140 (TPHA0C04140)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TPHA_0C04140 (TPHA0C04140)
PBAF complex
TPHA_0C04140 (TPHA0C04140)
SWI/SNF complex
TPHA_0C04140 (TPHA0C04140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
11533660
NCBI-ProteinID:
XP_003684998
UniProt:
G8BQQ2
LinkDB
All DBs
Position
3:888825..891695
Genome browser
AA seq
956 aa
AA seq
DB search
MSNLSIKQRSHLFQDTSMNNVTNNNNNSNSNNSVNYNNDNNSSNNNNNNNNNNNNNNSNN
NSNMNQQQNPFNNIGTPSFNIQQISPQILQNLTPQQLQLIQQRHQQLLRSRIQQAQQNQQ
NKQKQQQQQKQQQHQQQQQHQQQQQQQQQQQQQQQQEQQRLKQQEQQTQPRQQQQQQFDS
KQDMKQANTTRKQSKSSQVQQMKNAEPTEGNQNGFQLPFNLPPQIAQLPLPMQQQVLASL
KQQAIQKNNPSVVTAITMAQEQLQQQIQRIQQRQQVTQQGKEPTQTQGPQSLANKSQQKT
QKVNSGSGTQRKQLQSKRKTSNIPNKLQNVQQLQQYAPPQKMELPAFQTIKYNPPEAMIP
YQGYWSDKQATTDTLLYEQITQRDKSNRMDQSKEQNGYPPFSIFGFSDKEYTAKLWHNLK
YYEGSKEVRMASIRSTSQNVPSVSIWGNGYAGYGNGNTNTKTKIISGINDDHRPIIPDKM
LDMYKHAMTEVSEDLIPIRLEFDHERDKFSLRDTLLWNRNDTLLDVDDFVDHMLMDYRFD
PEFSSQISDIISQSIKEQIIDFQPNPYTNIQDERIGGDDMRVRIKFDIVIGQSQLVDQIE
WDISNPDNDPEEFATSMCNELELPGEFQTAIAHSIREQVHAYHKYLALLGYKFDGSAVED
ADIRSRILPNITVDNIYRASADSKLYTPNLLTISAAELERLDKDKDRDSRRKRRQGRFNR
RGVVITSNTSSIVGTNSGTPLGIGGNNAVLNSSSGTPTEVLLPDITDALRTFRTPIPSTV
LPGGLDLGPSVESFELKATTTSNPRPDKPKLQMPSCYIVDHIPGKSLLLSITVPKKENLK
LRMNATNRTTIVPHNYTATKSVISNVKQEAGHESSTSRKQLPDNAMDISPPTTMEPQVNR
PITMDKVDVNTSSNTINKETESKIDTELNPISSINHTTTGPQKINEDGQVESKTSA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatctatcaattaagcagaggtcacatttatttcaagacacatcaatgaataac
gttactaataacaataacaacagtaacagtaataattctgtgaattacaacaacgacaac
aatagcagcaataataataacaacaataacaacaataacaataataacaacagcaacaac
aacagcaacatgaaccagcagcagaatccatttaataatattggtactccatcatttaat
atacaacaaatatcacctcaaatcttacaaaatttaaccccacaacagttacagttgata
caacagcgtcatcagcaacttctaagaagtagaatccaacaagctcagcaaaatcaacaa
aataaacagaagcagcaacagcaacagaagcagcaacagcatcagcaacagcaacagcat
cagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaagagcaacagagg
ttaaagcaacaagagcaacagacacaacctagacaacaacaacaacaacagttcgacagt
aaacaagatatgaaacaggctaatacaacaagaaaacaaagcaagtcctcccaagttcaa
caaatgaagaatgctgagccaactgagggaaaccaaaatgggttccaattaccttttaac
ctgccaccacaaattgctcagctacctttgcccatgcagcaacaggtattagcatcacta
aaacaacaagctatacaaaaaaataacccatcagttgttacagcaatcacaatggctcaa
gaacaactgcaacaacagattcaaagaattcaacaaaggcaacaagtgactcagcaaggt
aaggaaccaactcaaactcaaggtccacaaagcttagctaataaatctcagcaaaaaact
cagaaagtcaattctggctcaggcactcaaagaaaacagttgcaaagcaaaaggaaaaca
tctaatattcctaataagttacagaatgtgcagcaacttcaacaatatgcacctccgcag
aaaatggagttgcctgctttccaaacaatcaagtacaatcctccagaagcaatgattcct
taccagggttattggtcagataaacaagcaactactgatacgttgttatacgaacaaata
acgcaaagagataagtctaatcgtatggatcagtcgaaagaacaaaatggttacccgcct
tttagtatatttgggttcagtgataaagaatatactgctaagttatggcataatttaaaa
tattacgaaggctcaaaggaagtcagaatggcttctattagatcaacatctcaaaatgtt
ccaagtgtaagtatttggggtaatggatatgctggatatggtaatggcaacacgaataca
aagacaaaaattatatccggcattaatgatgaccaccgcccaatcattcctgataaaatg
ttagatatgtacaagcatgctatgaccgaggtttcagaagatttaattccgatcagattg
gaatttgaccatgagcgtgataagttttctctaagagatactttactttggaatagaaat
gacacgttacttgacgttgacgattttgttgaccatatgttaatggactaccgatttgac
cctgaattttcatctcaaatatcggacataatttctcagtcaattaaagaacaaattatt
gacttccaaccaaatccttatactaatatacaagatgaaaggataggtggggatgatatg
cgtgtgagaattaaatttgatattgttataggccaaagtcaactagtagatcaaattgaa
tgggatatttcaaatccagataatgatccagaagaatttgcaaccagtatgtgcaatgaa
ttggagttgcctggggaatttcaaactgcgattgcacattcaattagagaacaagttcat
gcttatcacaaatatttagctttattaggatataagttcgatggttcggcggttgaagat
gctgatattcgaagcaggatattacctaacattactgttgataatatttatagagcttca
gcagattcaaagttatatacacctaatttattaacgatttctgcggctgaactggaaaga
ttagataaagataaagatagagattcaagacgtaagagaagacaaggtagatttaataga
cgtggtgttgtcatcaccagtaatacttcatccattgttggtactaatagcggtacaccg
ttaggtattggaggaaataatgcagttttgaattcctcatctgggactccaactgaagtt
ttgttacctgacattaccgatgcattgagaacatttagaacaccaattccaagtaccgtg
ttacctggtggtttagatttgggtccatcagtagagtcattcgagttaaaggccacaaca
acatcaaatcccagacctgataaacctaagttacaaatgccttcgtgttatattgttgat
catattcctggtaagtcgttattattatcgattactgtaccaaaaaaggaaaacttgaaa
ttgaggatgaatgctaccaatagaacaaccattgtgccacataattatactgctacgaaa
tcagttatatcaaacgttaaacaagaagcagggcatgagagcagcacatcacgaaagcaa
ttaccagacaacgcaatggacatctcaccaccgacaaccatggaaccacaagtaaaccgc
ccaatcacaatggataaagtcgatgtgaataccagttcaaatacaattaataaagaaact
gaatccaaaattgatactgaattgaatccaattagtagtataaatcatactaccacaggc
ccacaaaaaataaatgaagatggacaggtagagagcaaaacatctgcttaa
DBGET
integrated database retrieval system
