Tetrapisispora phaffii: TPHA_0C04880
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Entry
TPHA_0C04880 CDS
T02235
Symbol
TPHA0C04880
Name
(RefSeq) hypothetical protein
KO
K11763
chromatin structure-remodeling complex subunit RSC9
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0C04880 (TPHA0C04880)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0C04880 (TPHA0C04880)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
TPHA_0C04880 (TPHA0C04880)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
TPHA_0C04880 (TPHA0C04880)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_PUB
DUF2358
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-GeneID:
11534079
NCBI-ProteinID:
XP_003685070
UniProt:
G8BQX4
LinkDB
All DBs
Position
3:complement(1057043..1058833)
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AA seq
596 aa
AA seq
DB search
MDNFQPMVNTQVMGENTEVTNGNMFSNMAATPIRVSRNESSGLVDFSGFTATSTSSVAST
LAKLNIFQNLPKETSKGVDGLSRMKMSVQSNLPEEIKWGLKKYLAYSNKAPYLISLKDMP
DLLPIFKAFIQSMVPIVDNFDKPITINAKDEVSNADPLTVLQFGLNSLLILRNLAQDTDS
VQVLVKDSSIKEFILFILTKYETLFINKDTEKQIYHSNVSFANELIHYVLDIMEAVSSYM
APAKLDDPFFKSLITLLNYTKDRYLVISILRSLSRLLVRSKSDELSAAENLDEKSLSAIV
SFLLIDCDIELVTASLDFLYQYILPGNERISKLINDPIRMTQLSAILPKLLTSNIPLPNY
EQIDNHEIRLIKRLKPAPPKDAPPIDDKLFNELIAIQEPLRSIMWLRCCFEPINEAEVTQ
ITLWRTYEAKFSLAVREKTGKKLLPAVEFIKNVSNAFSNASAMVITDPATSKKRFVIKGI
QPRFTSLSLREAEEEHAKRITNSSSDIKKSVNNNITEEDDTIKPVEQNVLPELVFPQKLS
DISNATATFLCLLSNDTKGHGLQFCQSIKPLIIHKLVNVPPLTTALSEYMENTKLL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggataattttcagcctatggttaacacccaggttatgggtgaaaacacagaggtcacg
aatggaaatatgttttcaaacatggctgctactcctatcagagtctctagaaacgagtcc
agtgggttagttgatttttctggtttcactgctacctcgactagctctgttgcttctaca
ctagctaagttgaatattttccaaaacttaccaaaagaaacttcaaaaggtgttgatgga
ttaagtagaatgaagatgtcggtgcaaagcaatcttccagaagagatcaaatgggggttg
aaaaaatatctggcctatagtaacaaagctccgtatttaattagtttaaaggacatgcca
gatctattaccaatatttaaagcatttatccaatcaatggtaccaattgtggataacttt
gataagccgataacaatcaatgccaaggatgaggtaagtaatgctgatccattgacagtt
ttgcagtttggtttgaactcattgttgattttaagaaacttagctcaagatacagactca
gttcaagttttagttaaagatagttccatcaaggaattcatattgtttattttaacaaaa
tatgaaactttatttataaacaaagatacagaaaaacagatttaccattcaaacgtatca
ttcgctaatgagttgattcattacgttttagatataatggaagcagtttcctcctacatg
gctccagctaaactggatgatccattttttaaatcattgatcacattgttaaattacacg
aaagatagatacttggttatctctatccttagatccctgtctcgattacttgttaggtca
aaatcggatgaattaagtgccgctgagaatttagatgaaaagagcttgtctgcaattgtc
tcatttttattaattgattgtgatatcgaattggttacagcttcgttggatttcttatat
cagtatattttaccaggaaacgaaagaataagtaaactaataaatgatcctatcagaatg
actcaattatcagccatattaccaaaattattaactagtaatataccactcccaaattat
gaacaaattgataatcatgaaattagattaatcaaacgtttaaagccagcaccaccaaaa
gatgctccacctatcgatgacaaattattcaacgaattgattgcgatccaagaaccatta
aggtctattatgtggttaagatgttgttttgaaccaattaatgaagcagaagtaactcaa
attaccttgtggagaacatatgaagcaaaattttcactggctgtacgtgaaaagactggt
aaaaagctactaccagctgttgaatttatcaaaaatgtttctaatgctttcagtaatgca
tctgcaatggtgataacagaccctgccactagtaaaaaaagatttgtaattaaaggtata
caacctcgtttcacttctttgagcttaagggaagccgaggaagaacatgctaaaagaatt
acaaattcatcttctgatattaagaaatctgtcaataataatataactgaagaagatgac
acaataaaacctgtagagcaaaacgtcttaccggaactcgtattcccacaaaaattatct
gatatatctaatgctaccgcaacattcctttgcttgttatctaacgacacaaagggacat
ggtttacaattttgtcaaagcattaaaccattgattatacataaattagttaacgttcct
cctttaactacagctctgtcagaatatatggaaaatacgaagttattatga
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