Tetrapisispora phaffii: TPHA_0C04920
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Entry
TPHA_0C04920 CDS
T02235
Symbol
TPHA0C04920
Name
(RefSeq) hypothetical protein
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0C04920 (TPHA0C04920)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpf03041
]
TPHA_0C04920 (TPHA0C04920)
Spliceosome [BR:
tpf03041
]
Complex A
U2 snRNP components
U2 related factors
TPHA_0C04920 (TPHA0C04920)
Complex B
TPHA_0C04920 (TPHA0C04920)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
11533636
NCBI-ProteinID:
XP_003685074
UniProt:
G8BQX8
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All DBs
Position
3:1063428..1064117
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AA seq
229 aa
AA seq
DB search
MDRRYQQRNQYHRQDEKERCLFYYKVGVCRHGNKCSKSHTSPNRSHTIVLLNLVDFPRNA
DVTTSNTATTTTDESDKSTQETKPNKPTTKNKSTPPIDDKEYDSIYEDLYIELAKYGRIM
EMYICDNGNDHLRGNVYVRYSSEQNARDANNELNTRWFNGKPIYCDLTHIHDFGEAICRK
PEEKSGCERGDHCNFMHIRKPSPQLQTDLENAQRKKFQLNSNPYISKRA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggatagacgttatcaacaaagaaaccagtatcacaggcaagatgagaaagagagatgc
ctcttctactataaagtaggtgtatgtagacatggtaataagtgttccaagagccatact
agtccaaacagatcacatactattgtattactgaatttggttgatttcccaagaaatgca
gatgttacgacttccaatacggccaccaccactacagacgaatcggacaagtccacccaa
gaaacaaaaccaaataaacctacaacaaagaataaatcaacaccccctatcgacgacaaa
gagtacgattccatctacgaagacctatacatcgaactagctaaatatggtagaataatg
gagatgtatatatgtgataatgggaacgaccatctacgtggtaatgtctatgtaagatac
tctagtgaacaaaacgccagagacgcaaacaatgagttgaacacgagatggttcaatggg
aaaccaatatactgtgacctcacacatatacatgattttggagaggccatttgtcgtaaa
ccagaagaaaaatcaggttgtgaaagaggtgatcattgtaatttcatgcatatcagaaaa
ccttctccacaattgcaaaccgatcttgagaatgctcaaaggaaaaaattccaattgaac
tcaaacccttacatttccaagagagcgtga
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