Tetrapisispora phaffii: TPHA_0D00770
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Entry
TPHA_0D00770 CDS
T02235
Symbol
TPHA0D00770
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0D00770 (TPHA0D00770)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TPHA_0D00770 (TPHA0D00770)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Pre-60S particles
Helicases
TPHA_0D00770 (TPHA0D00770)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
11530990
NCBI-ProteinID:
XP_003685154
UniProt:
G8BS99
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All DBs
Position
4:155185..157002
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AA seq
605 aa
AA seq
DB search
MSKSLLWDNLDYQLQPWIRTAVDVMGFDEMTPVQASTIPLFARNKDVVVDSITGSGKTVS
FVIPILEKIIIEEANSSKLKKGHFHSLIISPTRELAKQIQSVIESFLTHYPEDLYPIKSQ
LIVGTNTNTVRDNVSEFLDNRPQILVGTPGRIFEFLKSSGIKSKSCSMVILDEADRLLDV
SFLKDIENIMQILPKQRRTGLFSATINSAGSNIFKIGLRNPVKVTVNSKILAPVTLSLNY
AITEPEKKFQLFLSVLNNYKFKKCIAYFPTCISVQYYYSFIQHLVEKKIVNEDLQIFSLH
GKLQTSSRMKTLETFTETLSNAVLITTDVAARGIDIPDVDLVIQLDPPTDADIFLHRCGR
TGRANKIGKAITFLNKGREEDYVSFMEVKNVKLELIELDVQGIPEDFNKIFMDWILEDRA
RFDHALRSYVAYIRHYSNHSASSIFRFQSFDFVGLCRMYGLFRMPRMPEITKNFKDDVEN
PKVFSNGWLIDPPIDLDLFKYSDSKQEKKRLAELKAIKDVHDKKRLKFLLKKKNESWSNK
TETKESKLERRAKMEIKRKAIEAELAKNDSENSDEEIEDWKQVVLQRKKKQKSSASGMQG
SFDDL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcattattgtgggataatttggattaccaactacagccatggatcagaacc
gctgtcgatgttatgggattcgatgaaatgacgcccgtacaggcatctactatcccactc
tttgccagaaataaggatgtagtcgtcgattctataactgggtctggtaagacggtgtca
tttgttataccaatactagaaaagataattattgaagaagcaaattctagcaaattaaag
aaagggcattttcattctttgataatttcaccaaccagagaattagccaaacaaatacag
tctgttatcgaatcttttttgactcattatcctgaagatttatatccgattaagtcacaa
cttattgttggtacgaatactaataccgttagagataatgtaagtgaattccttgacaat
agacctcaaatattagttggaacgccaggtagaatttttgagtttttgaaatcatctgga
attaaaagcaaatcgtgtagcatggttattttagatgaagcggatagattattggatgta
agttttctcaaagatatagagaatattatgcaaatattgccaaaacaaagaaggactggg
ttattttctgcaacaattaatagtgcagggtccaatattttcaaaattgggttgagaaac
cccgtcaaggttactgtgaattcaaaaattttagcaccagtaacattgagtttgaattat
gctataaccgagcctgaaaaaaaatttcaattattcttgagtgtgctgaataattataaa
tttaaaaagtgtatcgcatattttccaacatgtatatccgttcaatattattattcattt
attcaacatttggtcgagaagaagattgtaaatgaagatcttcaaatattctctcttcat
ggtaaacttcaaactagttcaagaatgaaaacgttagagacattcactgaaactttgagt
aatgctgttttgataaccactgatgttgctgcaagaggtattgacatccctgatgttgat
ttagtaatccaactagatccgcctaccgatgcggatatatttttacacagatgcggaaga
acaggtagggcaaacaagataggtaaggccattacattcttgaacaaaggtagagaggaa
gattatgtttcatttatggaagtcaaaaatgtgaagttggaattgattgaactagatgtg
caaggtattcctgaagattttaataaaatatttatggactggatattggaagatcgagct
aggtttgatcatgcgttgagatcatatgttgcatatattcgacattattcgaatcattct
gcttcctcaatttttcggtttcaatcatttgactttgtagggttatgcagaatgtatggc
ctcttcagaatgccaagaatgcctgagattaccaaaaattttaaggatgacgtagaaaat
cctaaagtattcagtaacggttggttaattgatcctccaattgatttagatttgtttaaa
tattcagatagtaagcaggaaaagaaaaggctggctgaacttaaagcaattaaagatgtt
catgataagaaacgtttaaaattcctattgaagaaaaaaaatgaatcatggtcaaacaaa
acagagacaaaggaatctaaactggaaagaagagctaaaatggagataaagaggaaggcc
attgaagctgagctagctaaaaatgactcggaaaatagtgatgaagaaattgaagattgg
aagcaagttgttttacaaagaaagaaaaaacaaaaaagttcagctagtggtatgcaaggt
agttttgatgatttatag
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