Tetrapisispora phaffii: TPHA_0D04140
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Entry
TPHA_0D04140 CDS
T02235
Symbol
TPHA0D04140
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TPHA_0D04140 (TPHA0D04140)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0D04140 (TPHA0D04140)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TPHA_0D04140 (TPHA0D04140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
11534276
NCBI-ProteinID:
XP_003685481
UniProt:
G8BT76
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Position
4:complement(887827..889143)
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AA seq
438 aa
AA seq
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MFSFGKTANNTATTGNTGTTAGFSFGQNSNTANTSAAAPGGLFSKPAAPQQTGSLFGGTP
SQQAQPATSGLFGNTNPTTTTGGLFGNATTAPASGGLFGKSTGTQSAGNGLFGNTIAQPA
QQQQQQPSLFGSNTLKSTQPSFAWTEQSQNNQQLSQPQQTQQQIQQQQILQQQQQMFQNS
NYPHQIQEQLIKCKELWDPSNNKSKLKSFVYNKVDETEAILYSKPNTIPQEEWDAAIEKK
PSKDMIPIEILGYDGLNQRNQLQRENVAQARVIFNQLLEKSTQLQQKHELSTSSRILKAQ
ARNSEIEKRILKLGSQLAILKSRGLPLNAHEEKMWDQFETLLKRSENPAGLGKTNELWAR
LAVLKEKAKTISEQLDNTLVVIDENGAKQNNRDHVSEEHVENKIDKIAEILSNQQRGITY
LNNVLVKDHATLDKLISK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctttggtaagactgccaataatactgctactaccggaaatacaggtactact
gccggattttcctttggtcagaatagcaacactgcaaacaccagtgctgctgcacctggc
ggactctttagcaaaccagctgctccacaacaaacggggagtctattcggtggtacacca
tcccaacaagcccaacctgccactagtgggttatttggaaacacgaaccctactacaacc
actggtggtctgttcggaaatgctacaactgctcctgcctcgggtggcctatttggaaaa
tctactggaacgcagtctgctggtaatggtctttttggcaatactatagcccagccagct
caacaacaacaacaacaaccttctttattcggttcaaatacattgaaatccacacaacca
tcttttgcttggactgaacaatcgcagaataaccagcaattaagccaacctcaacaaacc
caacaacaaatacaacagcagcagattctgcaacaacaacaacaaatgttccaaaactct
aactacccacaccaaatccaggaacaactaataaaatgtaaagaattatgggaccctagc
aataacaaatcaaaactaaagtcttttgtatataacaaggtcgacgaaacagaggccata
ctatacagtaagccaaatacaatccctcaagaggaatgggatgctgcaattgagaagaag
ccatcaaaagatatgattccaatagaaattttaggatacgacggtctcaatcaacgtaac
caattacaaagagaaaatgttgctcaagctcgtgtgatattcaatcaattgttagaaaaa
tctactcaattgcaacaaaaacatgaactaagtacatcttcaagaatattgaaagctcaa
gcgagaaattcagaaatagaaaaaagaatattaaagctaggatctcaattagccatttta
aagagtagaggcctaccattgaatgcacatgaagaaaagatgtgggatcaatttgaaact
ctactaaagagaagtgagaaccctgcaggtctaggcaaaactaatgaactttgggcacgt
cttgcagtactcaaggaaaaggccaaaacaatttcagagcaattagacaatactttagtg
gttatagatgaaaatggtgctaagcaaaataacagagatcatgtatcagaagagcatgtt
gaaaataaaattgataaaattgctgaaatattaagcaaccaacaacgtggtatcacttat
ctgaataacgtactagttaaagatcatgctaccctagataaactgatttctaaataa
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