Tetrapisispora phaffii: TPHA_0D04600
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Entry
TPHA_0D04600 CDS
T02235
Symbol
TPHA0D04600
Name
(RefSeq) ubiquitin-60S ribosomal protein L40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03010
Ribosome
tpf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
TPHA_0D04600 (TPHA0D04600)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TPHA_0D04600 (TPHA0D04600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tpf03011
]
TPHA_0D04600 (TPHA0D04600)
04121 Ubiquitin system [BR:
tpf04121
]
TPHA_0D04600 (TPHA0D04600)
Ribosome [BR:
tpf03011
]
Ribosomal proteins
Eukaryotes
Large subunit
TPHA_0D04600 (TPHA0D04600)
Archaea
TPHA_0D04600 (TPHA0D04600)
Ubiquitin system [BR:
tpf04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
TPHA_0D04600 (TPHA0D04600)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
Plexin_RBD
UBL_UBAC1
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
11531111
NCBI-ProteinID:
XP_003685529
UniProt:
G8BS20
LinkDB
All DBs
Position
4:complement(join(1005511..1005889,1006076..1006083))
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLKALASKYNCEKSVCRKCYARLPPRATNCRKRKCGHTNQ
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatttttgttaagactttaactggtaagacaattaccttagaagttgaatcttct
gacactattgacaatgttaaatctaagattcaagataaggaaggtattccacctgaccaa
caaagattaatctttgctggtaagcaattggaagatggtagaactttatccgattacaac
attcaaaaggaatctactcttcatttagtcttgagattacgtggtggtatcattgaacca
tctctaaaggctttagcttctaagtataactgtgaaaaatctgtttgtcgtaagtgttac
gccagattaccaccaagagctaccaactgtagaaagagaaaatgtggtcacacaaaccaa
ttgagaccaaagaagaagttaaaatag
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