KEGG   Tetrapisispora phaffii: TPHA_0E00530
Entry
TPHA_0E00530      CDS       T02235                                 
Symbol
TPHA0E00530
Name
(RefSeq) hypothetical protein
  KO
K14405  pre-mRNA 3'-end-processing factor FIP1
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TPHA_0E00530 (TPHA0E00530)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0E00530 (TPHA0E00530)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     TPHA_0E00530 (TPHA0E00530)
SSDB
Motif
Pfam: Fip1
Other DBs
NCBI-GeneID: 11531374
NCBI-ProteinID: XP_003685582
UniProt: G8BTC0
LinkDB
Position
5:88642..89613
AA seq 323 aa
MSSGDEDDKFLYGSDEETTIANKKRTKTKADGDVERRTKGNAIKKSKTDSVSKSDESESA
SDSEYSDEESDSDVEFIISTGTNDASLLDSNQTSGTITVASETDVSKVNEAGEKKTGELG
AADEQGSSEAAARKTETSLLDINGEGLFEGEPISSISPEVLKEKPWRQPGANLSDYFNYG
FNEYTWMEYLQKQEKLKQEYNPHKILMGLMALQQQGKLAVPQQKPIDQSSSTISNKLQNN
NSNNMNMNMGMNMNMNMNMNMDMNKMQNNPGHPPVPPSGFPMFGGFAPFPMPHMLQQMPN
GKFPPIPGAQPSQQQNTGSPQQK
NT seq 972 nt   +upstreamnt  +downstreamnt
atgagttcgggtgatgaagatgataagttcttatatgggtctgatgaagagactacaata
gcaaataaaaagagaaccaaaacaaaagcggacggtgatgttgaaagaagaacaaaaggt
aatgcgattaaaaaatcaaagacagatagtgtcagtaaaagcgatgaatctgaaagcgca
tctgattcggaatattcagatgaagagagtgattcagatgtcgagtttattatcagtact
ggcactaatgatgcatcactgttggattcaaatcaaacatcaggaacaattactgtagca
agcgagaccgatgttagtaaagttaatgaagctggagagaaaaaaacaggtgaactaggt
gctgcagatgagcaaggtagttctgaggctgcagcaagaaaaacagaaacatctcttctg
gatattaatggcgaaggtttatttgaaggtgaaccaatatctagtatcagtcccgaagta
ttaaaagaaaaaccatggagacaacctggtgctaatctaagtgattattttaattacggt
tttaatgaatatacttggatggaatatttgcaaaagcaagaaaagctaaaacaagaatac
aatcctcataaaatacttatgggattgatggcattacaacaacaaggtaaattagcagta
ccacagcaaaaacctatcgaccagagttcttctactatttcaaataagttacaaaacaac
aacagtaacaatatgaacatgaatatgggtatgaacatgaacatgaacatgaacatgaac
atggacatgaataaaatgcaaaacaatcctggccacccacctgtaccaccatccggattt
cctatgtttggcgggtttgctccattcccaatgccacatatgttacaacagatgccaaat
gggaaatttccaccaatccctggtgcccaaccatctcaacaacaaaatacaggttcaccc
caacagaaatag

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