Tetrapisispora phaffii: TPHA_0E01790
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Entry
TPHA_0E01790 CDS
T02235
Symbol
TPHA0E01790
Name
(RefSeq) hypothetical protein
KO
K12816
pre-mRNA-processing factor 17
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0E01790 (TPHA0E01790)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpf03041
]
TPHA_0E01790 (TPHA0E01790)
Spliceosome [BR:
tpf03041
]
Complex C
Other components
Step II factors
TPHA_0E01790 (TPHA0E01790)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_SCAP
WD_LRWD1
Beta-prop_DCAF4
Beta-prop_Nup120_160
B-prop_COPA_B_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
11531295
NCBI-ProteinID:
XP_003685706
UniProt:
G8BTP4
LinkDB
All DBs
Position
5:359679..361004
Genome browser
AA seq
441 aa
AA seq
DB search
MRLSIDYSSSSESETISDNDNGKLHVSTKSQELHGSKRPFNLTKSDLKRKRKQRKTKGPW
GSWDSTTDNESITSEIDELEIKNYPDEVVSEDSDIEEISEFYGSYLKDYKGRSFLTPSND
IDIDLQKPALSFKSYLPKKQLYRYKGHTNGTTDLKFFPNTAHMFLSGGNDNMIRLWDFYH
DRRCIRDYKGHKKAVRSVDFNNNGTVFFSSSYDQTVKIWDTETGKVKAKVKCNSIPNDVK
PRPLSDSEYIVGLSNSKINHYDQRVSSKNGLVQTYDHHQGSILCLKYFPDGSKFISSSED
KTVRIWENKINIPIKQIADTTQHSMPYMDIHPEGHYFSTQSMDNTIYSYGMKPKYKRQNK
KVFKGHQSVGYKISLSFSPDGRYICSGDTNSRVFIWDWKTTKLLRCLTINGNKPITQVTW
HPQETSKLLCSGGSGYIYIYD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagactttctatagattactcttcatcatctgaaagtgaaactatatcagataatgat
aatggcaaattacatgtttcaacaaaatcacaggaattacatgggtccaaaagacctttc
aatttaaccaaatcggatttaaagaggaaaagaaagcaacgtaaaactaaaggaccttgg
ggatcctgggatagcactacagataatgaaagcataaccagtgaaatagatgaattagaa
attaaaaattatccagatgaggttgtttctgaggactctgatattgaagaaatttctgaa
ttttatggatcctatttaaaagattataagggtaggtcattcttaactccatcgaatgat
attgatatagacttacaaaaaccagcattatcattcaaaagttacctaccaaagaaacaa
ctttatagatacaaaggtcacaccaatggtactactgatctaaaattctttcccaataca
gcacacatgtttctatcaggtggaaatgataatatgattagattatgggatttttatcat
gacaggcggtgtattagagattataagggtcataaaaaagccgtaagatcggtggatttc
aataataatggtacagttttttttagttcttcctatgatcaaaccgttaaaatttgggac
actgaaacagggaaagtaaaggctaaagtcaaatgtaatagtatacctaacgatgtgaaa
ccgcgacctttgagcgattctgagtatattgtcggtctttcaaattcaaaaattaatcat
tacgatcaaagagtttcatcaaaaaatggacttgttcaaacttatgaccatcaccaagga
agtatattatgcttaaaatattttccagatggctctaaattcatttcttcgtcagaagat
aaaactgtaaggatatgggaaaataaaataaacattccaataaaacaaattgctgataca
actcagcactcgatgccttacatggatattcacccggagggacactacttttctactcaa
agtatggataatactatatattcatatggtatgaaaccgaaatacaaaagacaaaacaaa
aaagtgtttaaaggacatcaatctgtaggttataagatcagtctttcattttctcctgat
gggagatatatatgttcaggggatacaaatagtagagtatttatttgggattggaaaact
acaaagcttcttcgatgtctcacgataaatggcaataaacctatcacccaggtaacctgg
catccacaggaaactagcaaactattatgctcaggaggatcgggttatatatatatatac
gattaa
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