KEGG   Tetrapisispora phaffii: TPHA_0E01790
Entry
TPHA_0E01790      CDS       T02235                                 
Symbol
TPHA0E01790
Name
(RefSeq) hypothetical protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TPHA_0E01790 (TPHA0E01790)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpf03041]
    TPHA_0E01790 (TPHA0E01790)
Spliceosome [BR:tpf03041]
 Complex C
  Other components
   Step II factors
    TPHA_0E01790 (TPHA0E01790)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_Vps41 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_SCAP WD_LRWD1 Beta-prop_DCAF4 Beta-prop_Nup120_160 B-prop_COPA_B_2nd Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 11531295
NCBI-ProteinID: XP_003685706
UniProt: G8BTP4
LinkDB
Position
5:359679..361004
AA seq 441 aa
MRLSIDYSSSSESETISDNDNGKLHVSTKSQELHGSKRPFNLTKSDLKRKRKQRKTKGPW
GSWDSTTDNESITSEIDELEIKNYPDEVVSEDSDIEEISEFYGSYLKDYKGRSFLTPSND
IDIDLQKPALSFKSYLPKKQLYRYKGHTNGTTDLKFFPNTAHMFLSGGNDNMIRLWDFYH
DRRCIRDYKGHKKAVRSVDFNNNGTVFFSSSYDQTVKIWDTETGKVKAKVKCNSIPNDVK
PRPLSDSEYIVGLSNSKINHYDQRVSSKNGLVQTYDHHQGSILCLKYFPDGSKFISSSED
KTVRIWENKINIPIKQIADTTQHSMPYMDIHPEGHYFSTQSMDNTIYSYGMKPKYKRQNK
KVFKGHQSVGYKISLSFSPDGRYICSGDTNSRVFIWDWKTTKLLRCLTINGNKPITQVTW
HPQETSKLLCSGGSGYIYIYD
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgagactttctatagattactcttcatcatctgaaagtgaaactatatcagataatgat
aatggcaaattacatgtttcaacaaaatcacaggaattacatgggtccaaaagacctttc
aatttaaccaaatcggatttaaagaggaaaagaaagcaacgtaaaactaaaggaccttgg
ggatcctgggatagcactacagataatgaaagcataaccagtgaaatagatgaattagaa
attaaaaattatccagatgaggttgtttctgaggactctgatattgaagaaatttctgaa
ttttatggatcctatttaaaagattataagggtaggtcattcttaactccatcgaatgat
attgatatagacttacaaaaaccagcattatcattcaaaagttacctaccaaagaaacaa
ctttatagatacaaaggtcacaccaatggtactactgatctaaaattctttcccaataca
gcacacatgtttctatcaggtggaaatgataatatgattagattatgggatttttatcat
gacaggcggtgtattagagattataagggtcataaaaaagccgtaagatcggtggatttc
aataataatggtacagttttttttagttcttcctatgatcaaaccgttaaaatttgggac
actgaaacagggaaagtaaaggctaaagtcaaatgtaatagtatacctaacgatgtgaaa
ccgcgacctttgagcgattctgagtatattgtcggtctttcaaattcaaaaattaatcat
tacgatcaaagagtttcatcaaaaaatggacttgttcaaacttatgaccatcaccaagga
agtatattatgcttaaaatattttccagatggctctaaattcatttcttcgtcagaagat
aaaactgtaaggatatgggaaaataaaataaacattccaataaaacaaattgctgataca
actcagcactcgatgccttacatggatattcacccggagggacactacttttctactcaa
agtatggataatactatatattcatatggtatgaaaccgaaatacaaaagacaaaacaaa
aaagtgtttaaaggacatcaatctgtaggttataagatcagtctttcattttctcctgat
gggagatatatatgttcaggggatacaaatagtagagtatttatttgggattggaaaact
acaaagcttcttcgatgtctcacgataaatggcaataaacctatcacccaggtaacctgg
catccacaggaaactagcaaactattatgctcaggaggatcgggttatatatatatatac
gattaa

DBGET integrated database retrieval system