Tetrapisispora phaffii: TPHA_0E03080
Help
Entry
TPHA_0E03080 CDS
T02235
Symbol
TPHA0E03080
Name
(RefSeq) hypothetical protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0E03080 (TPHA0E03080)
04121 Ubiquitin system [BR:
tpf04121
]
TPHA_0E03080 (TPHA0E03080)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
90S particles
Other 90S particles
TPHA_0E03080 (TPHA0E03080)
Ubiquitin system [BR:
tpf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TPHA_0E03080 (TPHA0E03080)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Sof1
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_NUP159_NUP214
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
NBCH_WD40
BBS2_Mid
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
11531219
NCBI-ProteinID:
XP_003685832
UniProt:
G8BU20
LinkDB
All DBs
Position
5:complement(646691..648157)
Genome browser
AA seq
488 aa
AA seq
DB search
MKIKTIKRSSDDYVPVKSTQESQMPRNLNPELHPFERAREYTKALTATKMERMFAKPFIG
QMGYGHRDGVYTIAKNYNQLNKLASSSADGVVKYFNMSTREEICSFKAHYGLVTGLCVRP
ETSATNKNEHYMISCGDDKTVKLWSVDSNDFSNNKKDDTIHKGDGLLKTYYGDHAFFGLD
HHRNNSTFVTGGAQIQLWDANRSKPISNLTWGADNVTSVKFNQTETDILASTGSDNSIVL
YDLRTNSPTQKIRQSMRTNAICWNPMEAFNFVIANEDHNAYYYDMRNMSRALNVFKDHVS
AVMDVDFSPTGDEIVTGSYDKTIRIYKTNQGHSREVYHTKRMQHVFQVKYSMDSKYIISG
SDDGNVRLWRSKAWERSNVKSTREKNKLEYDEKLKERFKYMPEIRRISRHRHVPIVVKKA
QEIKGIELNSIKRRETNERRTRKDLSFVSERRKQLVGAAFEYEDDNRKRKGKGSNKDEDA
DDVENEDI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaaactatcaaaagaagttcggatgactatgtgccagtgaagagtactcaa
gaatcacagatgcctcgtaatctaaatcctgagttacatccttttgaaagggctcgtgag
tatacaaaggctctgactgctaccaagatggaaagaatgtttgccaaacctttcattggg
cagatgggctatggtcatagagatggtgtctatactattgctaagaattataatcaatta
aataaactagcaagtagttctgctgatggtgttgtcaaatatttcaatatgtcaactaga
gaagagatatgctcattcaaagctcattatggtttggttactgggttatgtgtcagacca
gagacatctgccactaataaaaatgaacattatatgatttcttgtggtgatgataagaca
gtaaaattatggtcagtggatagcaatgatttttctaataataagaaagatgataccatt
cataaaggtgatggtcttcttaagacttactacggtgatcacgcattctttggtctagat
catcatagaaataattcaactttcgttacaggtggtgcacaaattcaactatgggatgca
aacagatctaaaccaatttctaatttaacatggggtgctgataatgtcaccagcgtaaag
tttaatcagacagaaacagatattttagcaagtacaggtagtgacaactctattgtcttg
tacgatttgagaacaaattctccgacgcaaaaaattagacaaagcatgagaactaatgca
atctgttggaatccaatggaagcatttaatttcgtaattgctaatgaagatcataatgca
tattactatgatatgagaaatatgtctagagcactaaatgttttcaaagatcatgtgagt
gcagttatggatgttgatttctccccaactggtgacgaaatagttacaggttcttatgat
aaaactattagaatatataaaaccaatcaaggtcattcccgtgaagtttatcatactaaa
agaatgcaacatgtcttccaagtaaaatactcaatggatagtaaatatatcatcagtggt
tctgacgacggcaatgttagattatggagaagtaaagcttgggaaagatctaatgtcaag
agtacccgtgagaaaaataaattagaatatgacgagaaattaaaagaaagattcaagtac
atgcctgaaatcagaagaattagcagacatagacatgttccaatcgttgtcaagaaagca
caagaaattaagggcattgagttgaattctattaagagaagagaaacaaatgaaagacgt
acaagaaaagatttatcgtttgtttcagaaagaaggaaacaactagtaggtgctgcattt
gaatatgaggatgataatagaaaaagaaagggtaaaggatcaaacaaagatgaagatgct
gatgatgtagaaaatgaagatatctga
DBGET
integrated database retrieval system
