Tetrapisispora phaffii: TPHA_0E03560
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Entry
TPHA_0E03560 CDS
T02235
Symbol
TPHA0E03560
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0E03560 (TPHA0E03560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0E03560 (TPHA0E03560)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TPHA_0E03560 (TPHA0E03560)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Dmd
Motif
Other DBs
NCBI-GeneID:
11531168
NCBI-ProteinID:
XP_003685880
UniProt:
G8BU68
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All DBs
Position
5:complement(753804..754946)
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AA seq
380 aa
AA seq
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MNSIENSVIDVKPLVFPKDVLARISPDLILQRYLSLNLRPSIRSFDEFRDISVSNIDDIE
NEFADNVLGTNILKCGKTIIITTITASIIKEENQDETFERYYEDISGVERRRNKVSEYGS
VYPVVEIERGRGNAPPSDEEMNIGQKLHDNILHSGLISKKSLKVDYGVRITDLETNKSKI
IYPEEDEINDVPILQLNHYQKNLKYVLHAKITVFSRTGPLFDLCWNSLTYALQNTKLPKA
FIDEKAVSLKTIIRSRGKTTELRENFNIICDTNTRVPLQLNKENIAYASNYGIVDLDYDL
IDTEYEEKNNDNDKKTVLLADINTESEEEYINSSISIITNKYGNLKNIIVLGGTSKISME
ILKKSISLSKIRAHDLESKA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgatagaaaattctgtaattgatgtaaagcccctggtgttccctaaagatgtt
ttagccagaatttcaccagatttaattttacagagatatctttcattaaatcttagaccg
tccataaggagctttgatgagttcagagatatatcagtgagtaatatagatgatatagag
aatgaatttgctgataatgtactgggtacaaatattttaaaatgtggcaaaactattatc
ataactacaattactgccagcataattaaagaagaaaaccaagatgaaacttttgaacga
tattatgaagacattagcggcgttgaaagaagaagaaataaagtgtcggaatatggttcg
gtatatccagttgtggaaatcgaaaggggaagaggcaatgcccctccgagtgacgaggaa
atgaatattggacaaaaactacatgataatattttgcattcaggtttaatttcgaagaaa
agtctaaaggtagattatggtgtacgaattacagatttagaaactaataaatccaaaata
atatatcctgaagaggatgaaattaatgatgtacctattttacaactaaaccattatcaa
aaaaatctaaaatatgtattacacgcaaaaattactgtgtttagtagaactggtccatta
tttgatttatgttggaattcgctaacttatgctcttcaaaataccaaattaccaaaagct
tttattgatgagaaagcagtaagtttgaaaacgattatcagatccaggggtaaaaccaca
gaacttagagaaaattttaatatcatatgtgatacgaacactagggttccactacaatta
aataaagagaacattgcatacgcttcaaattatggtattgtagatcttgattatgatctc
attgacaccgaatatgaagaaaaaaataatgataatgacaagaaaacagtacttttagct
gacataaatactgagtctgaggaagaatacatcaattctagtatatctataataactaat
aaatatggaaatttaaagaatataatagttctgggaggtacaagtaaaatatcgatggag
atattaaagaagtcaatatcactttctaaaatcagggcccatgatttagaaagtaaagca
tag
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