Tetrapisispora phaffii: TPHA_0F00240
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Entry
TPHA_0F00240 CDS
T02235
Symbol
TPHA0F00240
Name
(RefSeq) hypothetical protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
tpf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0F00240 (TPHA0F00240)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TPHA_0F00240 (TPHA0F00240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpf03041
]
TPHA_0F00240 (TPHA0F00240)
04121 Ubiquitin system [BR:
tpf04121
]
TPHA_0F00240 (TPHA0F00240)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0F00240 (TPHA0F00240)
Enzymes [BR:
tpf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
TPHA_0F00240 (TPHA0F00240)
Spliceosome [BR:
tpf03041
]
Complex B
Other components
Prp19 complex
TPHA_0F00240 (TPHA0F00240)
Complex C
Prp19-CDC5 complex
TPHA_0F00240 (TPHA0F00240)
Ubiquitin system [BR:
tpf04121
]
Ubiquitin ligases (E3)
U-box type E3
TPHA_0F00240 (TPHA0F00240)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
TPHA_0F00240 (TPHA0F00240)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Prp19
WD40_Prp19
Beta-prop_IFT122_1st
WWC1
TMEM145_N
Motif
Other DBs
NCBI-GeneID:
11535473
NCBI-ProteinID:
XP_003685945
UniProt:
G8BUS9
LinkDB
All DBs
Position
6:complement(44772..46340)
Genome browser
AA seq
522 aa
AA seq
DB search
MICAISGKSPKNPALSLKSKCIFEKTLLEQYVATSAKDPITNETMTMEDIIELANTPQQV
SMINALNSSTLNSNYSIPNLLSTLQNEWDAVMLENFKVRKQLDLFTKQLSTAMYERDAAK
LVAAKLLREKEDLASELSRLTSHIASSESSDSTISEPLYGLSKDTNKESSVLPIPKEFLE
RIITESQQFVQLSKTNQDKYKLSGSQKLVDNIKKWDIVPSSGLSVIMNSDNGNTFKKAIL
HSRTINIIVNPDLIKSIDGEFIDNIKYCYSTTDDKVLLYTDDRHQITIYNTETKAAQKVE
LTDVEDIILLRNHHQIANDYFLWADSQGKIGLTSMDLKKTYIITEKSDEVTNYHSADLHK
DGLLLALINDREVLITDITKPSETRITFQMGKEIPDDNSTIKKVQFSTNGYWMLVATEKN
VMVFDLRKDPGTLAIEPFNTSEFEFWDTDPSQKYMLTLANSKITIHTFKKATKKWEAPTG
SNNQFTFPEQTTDVTSFYVLCSNGKLTLIMKTKTDISICSTV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatatgtgcgattagtgggaaatcacctaaaaatccagcattatcattgaaatcgaaa
tgcatatttgagaaaactttacttgaacagtatgttgcaacttctgccaaagatcctatc
acaaatgaaactatgaccatggaggatatcatcgagcttgcaaacactccgcaacaggtg
tcgatgatcaatgcattgaattctagtacactgaatagcaactatagtatcccaaatttg
ttatcgactttacagaatgaatgggatgctgtcatgttagagaactttaaagtaagaaaa
caattagatctttttacgaaacaactatcgactgccatgtatgaaagagatgctgccaag
ttagtcgcagcaaagttgttaagagaaaaggaagaccttgcttcagaattaagtaggttg
acttcacatattgctagttcagagtctagtgattcaactatttcggagccactgtacggc
ttatcaaaagacacaaataaagaatcttctgtattgccaattccaaaagagtttcttgaa
agaattattacagaatctcaacaattcgttcaactttcgaaaactaaccaagataagtat
aaactatccggaagtcaaaaattggttgataacattaagaaatgggatattgtaccttca
tctggattatcagttattatgaattcggataacggtaacactttcaaaaaggctatcctc
catagtcgtaccatcaatatcatagttaacccagatttgattaagagtattgacggtgaa
tttatagataatataaaatactgctattccaccaccgatgataaagttctattatacacc
gatgatagacatcaaataacgatatataacacagagaccaaggcagcacagaaagttgaa
ttaactgatgttgaagacataatattgcttcgcaaccaccaccaaattgcaaatgattac
tttctatgggctgatagccaaggcaaaattggtttgacatcgatggatttaaaaaaaact
tatataataacggaaaaatcagatgaagtaacgaattatcacagtgcagatttacacaag
gatggcttgttattagctctaatcaacgacagagaagtcctaatcacagacataacaaaa
ccttcggagacaagaatcacctttcaaatggggaaggaaatccctgacgacaacagtacc
ataaagaaagttcaattcagtaccaacggttactggatgcttgttgcgaccgaaaaaaat
gtcatggtcttcgatttaagaaaagatccaggaactctggctatagagcctttcaacaca
tccgaatttgaattctgggacacagacccttcccaaaagtacatgctcacattggccaat
tccaaaataacaatacatacatttaagaaagccaccaagaagtgggaagcaccaacagga
agcaacaaccaattcacgttcccagagcaaacaacagatgtcacgtccttttacgtcctt
tgcagcaacggaaaattgaccctgattatgaaaacaaaaacagatatatccatatgctca
actgtataa
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