Tetrapisispora phaffii: TPHA_0F03230
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Entry
TPHA_0F03230 CDS
T02235
Symbol
TPHA0F03230
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03030
DNA replication
tpf03410
Base excision repair
tpf03420
Nucleotide excision repair
tpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPHA_0F03230 (TPHA0F03230)
03410 Base excision repair
TPHA_0F03230 (TPHA0F03230)
03420 Nucleotide excision repair
TPHA_0F03230 (TPHA0F03230)
03430 Mismatch repair
TPHA_0F03230 (TPHA0F03230)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0F03230 (TPHA0F03230)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0F03230 (TPHA0F03230)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TPHA_0F03230 (TPHA0F03230)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TPHA_0F03230 (TPHA0F03230)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
RuvB_N
RNA_helicase
AAA_assoc_2
AAA_16
AAA_33
AAA_17
RCF1-5-like_lid
AAA_11
AAA_14
AAA_22
AAA_18
AAA_5
nSTAND3
AAA_28
NACHT
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
11535435
NCBI-ProteinID:
XP_003686238
UniProt:
G8BUL8
LinkDB
All DBs
Position
6:704126..706663
Genome browser
AA seq
845 aa
AA seq
DB search
MVSITDFFVKGNAKGAARKKKNDDGGDTKKTTIDIIDLDDSDLDIAEVKSPVKRESIVID
TPPSVKKQIDKVIKKEEKPPSKVPVKNKSSNASVTAADVLATIPSVDLSEVHIKENVKFD
FRAAAISGDSEVSTQGDFPEGQDNCLLGLTVVFTGVLPTMERGAAENIARRYGAKVTKSI
SGKTSFVVLGDEAGPKKVEKIRQLKVKAINEDGFRKLIAGMPADGGDGDAAEKARLKKQQ
EEARVLKEANEMAEEAEEKELKIKQARLSGDFVKREDLIREQDKLWTVKYAPTNTNQICG
NKSSVNKLKNWLINWEASKASNFKSPGRDGSGIFRAAMLYGPPGIGKTTAAHLIAKDLGY
DILEQNASDVRSKSLLNAGVKNALDNMSVVGYFKNKDDVNDVNGKKFVIVMDEVDGMSGG
DRGGVGILAQFCRKTSTPLILICNERNQPKMRPFDRVCLDVQFRRPDANSLKARLMTIAV
REKFKLDPNVIDKLVQATRGDIRQIINLLSTISKTSKNIDHTNISEISKSWEKNIALKPF
DIVHQMLSGRIYSDLGANTFTLNDKIALYFDDFDFTPLMVQENYLSTRPSVLKPNESHLE
AVAQAADAISLGDLVERNIRSSEQLWGLLPLHAVLSSVLPSSKVAGQFAGRVNFTGWLGQ
NSKRNKYYRLLQELQYHTRLSTSSNKISLRLEYMSTFKHRLLDPILKDGSDGIPSVISLM
DDYYLTKEDWDYIMEFMVGPESTDLLLKKIPSTVKSGFTRKYNSTTHPVAIYRAGVSTTG
STTTVKPDFEDVVDADDSVPATDDTEDGKDDDLKKDKLIKQKKAPVKRKASSTATKKGAA
KKKKA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggttagtattactgacttttttgttaaaggtaacgccaaaggtgctgccaggaagaag
aagaacgatgatggtggtgacacgaaaaaaacaactatcgatataatcgatctcgatgac
agtgacttggacattgctgaagtgaaatctccagttaaacgtgagagcatcgtaattgat
actcctccatctgttaagaaacaaatcgataaagtgatcaagaaggaagaaaagccacca
tctaaggtcccagtaaaaaataaatcatcgaatgcatcagttaccgcagcagacgttttg
gctacaatcccatctgttgatttatcagaggttcatattaaggaaaatgttaaatttgat
tttcgtgcagctgctatttctggtgattcagaggtgagcactcagggtgattttcctgaa
ggtcaggataattgtctattaggactaactgttgtctttactggtgttctaccaacgatg
gagcgtggtgcagcagaaaatatagcaagaagatatggtgcgaaggttactaaatctata
tccggtaagacctctttcgttgtattgggtgatgaagcaggtccaaagaaagtagaaaaa
attagacaacttaaagttaaggccatcaatgaggatggtttcaggaaattaatagccggt
atgcctgcagacggtggagatggtgacgctgctgagaaggcaagattaaagaagcagcaa
gaagaagcgcgggtgttgaaagaagcaaatgaaatggctgaagaggctgaagagaaggaa
ttgaaaattaaacaagcaaggttatctggtgattttgttaagagagaagacttgattaga
gaacaagacaaactttggacagtcaaatatgccccaacaaatacgaatcaaatatgtggt
aataaatcgagtgttaataagcttaaaaattggttaatcaattgggaagcttcaaaagca
tcaaattttaagagtccaggtagagatggatctggtatttttagagcagccatgctatat
ggtccaccgggtataggtaaaaccacagccgctcacctcattgctaaagacttaggttat
gatattttagaacaaaatgcttctgatgtacgttctaaatcactgttaaatgcaggcgtt
aagaacgcccttgataatatgtctgttgttggttattttaaaaacaaagatgatgtaaat
gatgtgaacggtaaaaaatttgtaattgtgatggatgaagttgacggtatgagtggtggt
gataggggtggcgtgggtatactagctcaattctgtcgtaagacttctacaccattgatc
ttgatttgtaatgagagaaatcaacctaaaatgaggccatttgatagagtttgtttagac
gttcagtttagaagacctgatgcaaatagtctaaaagcaagattgatgacaattgcagta
agagaaaaatttaaactagatcctaatgtgattgataaattagtccaagctactagaggt
gatataagacaaattattaatttactttcaacaatatctaaaacctctaaaaatattgat
cacacaaatatttcagaaatatcaaaatcttgggaaaagaatatagctttaaagcctttt
gatattgttcatcaaatgttaagtggtagaatatattccgatctaggggctaatacattt
acactaaacgataaaattgcattatattttgatgattttgattttacaccattaatggtt
caagaaaattacttaagtacaagaccgtcagtgttaaaaccgaatgaaagtcatttggaa
gcagttgcccaggctgctgatgctatatctttgggtgatcttgtagaaagaaatattcgt
tcaagtgaacaactatggggtttattaccattacacgctgtattatcctcggtactgcct
tcatctaaagttgccggtcagtttgccggcagagttaattttactggttggttgggccaa
aattctaaacgtaataagtattacagattattacaagaattgcaatatcatacacgtcta
agtacatcctcgaataagatcagccttaggttagaatatatgtcaacatttaaacataga
ctactggatccgatattgaaagatggatcagacggtataccatctgttatttctttgatg
gatgattattatttaacaaaagaagattgggattacatcatggaattcatggtcggacct
gaatccacagatttgttactgaaaaaaattccaagtacagttaagagtggttttacaaga
aagtacaatagtactacacaccctgttgccatttatagagcaggtgtcagtacaactggt
agtacaacaacagtgaaacctgattttgaagacgtggtggatgcagatgattctgtacca
gcaactgatgataccgaggacggaaaggacgacgatttaaagaaagataaattaatcaag
cagaaaaaagcacctgtcaagagaaaagcatcatccacagctaccaagaaaggagctgcc
aaaaagaaaaaggcatag
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