Tetrapisispora phaffii: TPHA_0G01190
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Entry
TPHA_0G01190 CDS
T02235
Symbol
TPHA0G01190
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TPHA_0G01190 (TPHA0G01190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0G01190 (TPHA0G01190)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0G01190 (TPHA0G01190)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
TPHA_0G01190 (TPHA0G01190)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
TPHA_0G01190 (TPHA0G01190)
RSF complex
TPHA_0G01190 (TPHA0G01190)
WICH complex
TPHA_0G01190 (TPHA0G01190)
B-WICH complex
TPHA_0G01190 (TPHA0G01190)
NORC complex
TPHA_0G01190 (TPHA0G01190)
BRF complex
TPHA_0G01190 (TPHA0G01190)
NuRF complex (fruit fly)
TPHA_0G01190 (TPHA0G01190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
CHDII_SANT-like
AAA_14
DEAD_2
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
11535716
NCBI-ProteinID:
XP_003686390
UniProt:
G8BVM8
LinkDB
All DBs
Position
7:complement(240302..243658)
Genome browser
AA seq
1118 aa
AA seq
DB search
MEKELVATTEVVTTDIKNAEGICSNKILEINGDLKAEINSESVDVEIDEQDVSSDDIHDS
SEELEDENPEIVKDEKYWEERRHKFILDVDPKIAKLRDKNDTYLRFKHLLNVTDLFRHFL
GIRAKQDKNIQKLLKRIDEENSKKLNHSAKSGRAKSKGSRHGRKSEKEEDAELLVEEEDD
DVDDKLTLDSNQYVSKSPSYIKSGTLRDYQIQGLNWLISLYENKLSGILADEMGLGKTLQ
TISFLGYLRYHKQVDGPFLVIVPKSTLDNWRREFKKWTPDVNAVILHGDKEKRHDILQNR
VLQAKFDVLITSYEMIIKEKNVLKKVAWEYIVIDEAHRIKNEQSSLSQIIRLFYSRNRLL
ITGTPLQNNLHELWALLNFLLSDVFSDSELFDEWFEQNNSEEDQEVVVQQLHTVLNPFLL
RRIKADVEKSLLPKIEVNLYVGMAQMQRKWYKSLLEKDIDAVNGAVTKREGKTRLLNIVM
QLRKCCNHPYLFEGAEPGPPYTTDEHLVFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRL
LDILEDYCYLRDYEYCRIDGSTSHEERIEAIDEYNKPDSDKFIFLLTTRAGGLGINLVTA
DTVVLFDSDWNPQADLQAMDRAHRIGQKKQVYVYRFVTENAIEEKVIERAAQKLRLDQLV
IQQGTGKKTASIGNNKDDLIEMVQYGAKDVFEKEEGVMTEDIDIDEILQKGEKKTKELNA
KYESLGLDDLQKYNGLEGQSAYEWNGQDFQKKQSEEKFVWINPSRRERRREQQTYSVDDY
YKDIIGGGSKSKDKISKSQKPPKAPKNINLQDFQFYPKELVPLLEKEQLAYKKKVNYRVT
KYDVSEMSFNEDDLSDNDSETPADENLKKKIKALQDAINNSEEFTKEDELEKQRLISKAF
LNWNKRDLFAFVNACSKYGKDNIDMIQKSFDSKTPEEVKAYHKVFWERYSELNGYEKYIA
TIETGMRKIEKLRIQELLVRKKIQQYSFPLREMRIQYPPNNARKVYSTLEDKFILMMIDK
YGLFDDKFYEKLKQEILTSKHFTFDWYIKSRSTNDLSKRVTTLLSLVQREFEAPATLKKK
RTKPLSREETPVSYTATPVPLPFNTVSGGTFKKFKHNG
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaattggttgcgactactgaagttgtaactaccgatataaagaatgctgag
ggtatatgctcgaataaaatcttagagattaatggggacctcaaggcagagatcaactcg
gaaagtgttgatgtcgagattgatgagcaagatgtttcttctgatgatatccatgattca
agtgaagaattagaagatgagaacccagaaattgttaaagatgaaaagtattgggaagaa
cgtagacataagtttattttggatgtagaccctaaaatagcaaaattaagagataaaaat
gacacatatttaagattcaaacatcttttgaatgttactgatcttttcagacatttcctt
gggattagagcaaaacaagataagaatattcaaaaattgttgaaacgtatcgatgaagaa
aattctaaaaaattaaatcattcagcaaaaagtggtagagcaaaatctaaaggttcacgt
catggtagaaaatcagagaaggaagaagatgcagagttgctagtagaagaagaagatgat
gatgttgatgataagctaactttagatagtaatcagtatgtctcaaaatcaccgtcatat
ataaaatcgggcacattaagagattatcaaatacaaggtttaaattggttgatatcgtta
tatgaaaataaattatctggtatcttggccgatgaaatgggtctgggtaaaacattgcaa
actatatcattcttgggatacttaaggtatcacaagcaagtcgatggaccatttttagta
atagtaccgaaatccactctggacaactggagaagagaatttaaaaaatggacaccagat
gttaatgcagtaattttacatggtgataaagaaaaaagacatgacatcctacagaataga
gtactacaggcaaaatttgatgttttaattacatcttatgagatgattattaaagaaaaa
aacgttttaaaaaaagtagcatgggagtacattgtaattgatgaagctcatcgtatcaaa
aatgaacagagttccttatcacaaataattagattattttactctagaaacaggttgttg
ataactggtacgcctttgcaaaataatctacatgagttatgggccttattaaattttctg
ttatctgatgttttttctgattccgaattatttgacgaatggtttgaacaaaacaacagc
gaagaagatcaagaagttgttgttcaacagctgcatacagtactgaatccatttttgtta
agaagaataaaagcagatgttgagaaatcactccttccaaaaattgaagttaatttatac
gttggaatggctcaaatgcaaagaaaatggtataaatccttattagaaaaagatattgat
gctgtaaatggtgctgtcacaaaaagagaaggtaaaacaagattattaaatatcgtaatg
caactgagaaaatgttgtaatcatccatatctatttgaaggtgcagaaccaggtcctcct
tacacaacggacgaacatctagtttttaactcagggaaaatgatcatattggataaatta
ttgaagagactaaaagaaaaaggttctcgtgtactgatattcagtcaaatgtcgagactg
ttagatatcttggaagattattgttatctaagagactatgaatattgtagaattgatgga
tctacatctcatgaagaacgtattgaagctattgatgagtataataaacctgattcagat
aagtttatatttttgttaacaacccgtgcaggtggattgggtattaatcttgttactgca
gatacagtagtgctatttgattctgattggaatccccaagcagatttacaagctatggat
agagcacatagaatcggtcaaaaaaaacaagtttatgtctataggtttgtaactgaaaat
gcaattgaggaaaaggtgattgaaagagctgcccaaaaactaaggttagatcaactagtg
atacaacaggggacaggtaaaaaaactgcatcaattggtaataataaagatgatttgata
gagatggtacaatatggtgctaaggatgtatttgagaaagaagaaggtgtcatgactgag
gatattgatatagatgaaattctacagaaaggtgaaaagaaaacaaaagaactgaatgca
aaatatgaatctctaggtctagatgatttacaaaaatataatgggttggaaggtcaatca
gcctatgaatggaatggacaagatttccaaaaaaagcagtcagaagaaaagtttgtatgg
attaatccatcaaggagagaaagaagaagagaacagcagacctattcggttgatgattat
tataaggatataataggtggtggttcaaaaagcaaagacaaaatttccaaatcacaaaaa
cctcccaaagctccaaagaacatcaatttgcaagattttcaattttatccaaaggagtta
gtgcctttgttagaaaaagaacaactagcatataaaaagaaagttaattatagagttaca
aagtatgatgtcagtgaaatgtcttttaatgaagatgatctgtcagataatgattctgaa
acaccagctgatgaaaatttgaaaaaaaaaataaaagctctacaagatgcgataaataac
agtgaagaatttactaaagaggatgaattggagaaacagagattgatttcgaaggcattt
ttaaattggaataaaagggatctgtttgcatttgttaatgcatgttcaaagtacggtaaa
gataatatcgatatgattcaaaagtcgttcgattcaaaaactccagaagaagttaaagcc
taccataaagtattttgggaaagatattctgaacttaatggttatgaaaaatatatagca
acaattgaaaccggcatgagaaaaattgagaagttaagaattcaagaattattagtaagg
aagaaaattcagcaatattcatttcctctacgtgaaatgagaatccaatacccaccaaat
aacgcacgcaaagtttacagtactttagaagacaaatttattctaatgatgatagataag
tatggtttatttgatgacaaattttatgaaaagttaaaacaagagatacttacaagtaaa
cattttacatttgattggtatataaagtctaggagtacaaatgacttgtcaaaaagggtg
acgactctgctatcgttagttcaaagagaatttgaagccccagcaacattgaaaaagaag
aggacaaaaccattaagtagagaagaaacccctgtttcttatactgcgactccagttcca
cttcctttcaatacagtttcaggtggtacattcaaaaaatttaaacataatggataa
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integrated database retrieval system
