Tetrapisispora phaffii: TPHA_0I00350
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Entry
TPHA_0I00350 CDS
T02235
Symbol
TPHA0I00350
Name
(RefSeq) hypothetical protein
KO
K19782
exoribonuclease II, mitochondrial [EC:
3.1.13.1
]
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tpf03029
]
TPHA_0I00350 (TPHA0I00350)
Enzymes [BR:
tpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
TPHA_0I00350 (TPHA0I00350)
Mitochondrial biogenesis [BR:
tpf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
TPHA_0I00350 (TPHA0I00350)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-GeneID:
11534355
NCBI-ProteinID:
XP_003686976
UniProt:
G8BXB4
LinkDB
All DBs
Position
9:complement(65929..68760)
Genome browser
AA seq
943 aa
AA seq
DB search
MTVHLIRRNIQSSASALKLATRRTKYLEKRLPASFNLELVKSKFLERTKGLEHISEIKEV
DEIQNQSMMTFNNEYIVPSKVWFDTVTSSGSFSNDLINETLISKKWKKFPDLPIKMNGDY
SFNALQLFDRSLDIGDLVLLRNSDKELLMCVDIPMSIEDPRFTFAKPDGTLVFSTKQNVT
LRILNTLPKNILNHDLIKNKYEAGLINRKENNAIKLPSLPVVARQIATSPLPSEISRIAA
RDLNVNLKKLEVLHRYISDGVETSSISFLKLVHLVQNVDLNKLARNRADHDANHISNIIR
NTKDDIQYMTKIDAITLLSTYWAVIQQQQSQLWGDIQIHSALLFPISVSVLPFNNVIYLN
ETIPRVATDENINKFTEAINKHNLEKINEKFPDFLNMLKEYGNGCYYGNEKITTIISKLF
RRIETYKNKELSRDNCQKLYNELNPSNKILNSLLLSKDLCLPEISGTTRTEQLIYSLTEV
DNHAIIDQRRHDFKDLKVFCIDEKTAHEIDDGVSVLRKDGNITRLFIHIADPASLFPLHN
TIENNSTSDEILNIAFRRAFTTYLPEFVLPMLPKSFCTKSDLGNTGKMTNTITFSVDFDK
SSCSILEDTFEIQLGKVNNFPKNTTYKEVDKILNSSIKRENDIERDLREMRFIANHLRKC
RIDNSAVIFGEGFNKGAVNLIEKKQDGEKSYKVNFKDSETTPSNIIVSEFMILANSLAGK
YFKNHKIPAIYKTYKGLNMKPKASSQFKKILNVNKKRLPSIKEISKIGSLLSSSTFSSKP
SIHEMIGTDQYATVTSPLRRFPDLINHFQLHRYLTNQPLCFSQEKLDEMVWHLIERDTIL
RHYSRKFNKYWTLQYLNEKIEGNPLLRFDVMVQSVSENGRVHCILPKLSYATGTLKLKPS
ATTIPAIGEIIKNCKIANIDCLGNSLEFAIDENQEHDRVNTFT
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgacggttcatctaatcagaagaaatatccaaagtagtgcttcggcgttgaagctagca
acaaggaggacaaaatacttagaaaaaaggctgccagcgtcctttaatttagagttagtt
aaatcaaagtttttggagagaactaaaggcctagaacacatatcagaaattaaggaagta
gatgaaattcaaaatcagtcaatgatgacgtttaataatgagtatattgttccttctaaa
gtttggtttgatacagtgacgtcttccggatcgttttcaaatgatttgataaatgagaca
ttgatttcaaagaaatggaaaaaattcccggatttaccaataaaaatgaatggtgactat
tcatttaatgcattgcaattatttgatagaagtttagatataggtgatcttgttcttcta
cggaattcagataaagagcttcttatgtgtgttgatattcctatgagtatagaagatcca
cggtttacattcgcaaaaccagacggtacattagtattctcaacaaagcaaaatgtaact
ttaagaatacttaacacacttccgaaaaatattctaaaccatgatttgataaagaataaa
tatgaagcgggtctgataaataggaaagaaaataatgctattaaattgcctagtttacca
gtcgttgcccgtcaaattgcaacatcacctttaccttcagagatatcgagaattgcagca
agagatttaaatgttaatttaaaaaagttggaagtactccatagatatattagcgatgga
gtagaaactagttccatctcctttttgaaattagttcatctggttcaaaatgttgatctt
aataagttagctagaaatagagctgatcatgatgctaatcatatctcgaacataatacgg
aacactaaagatgatattcaatatatgacaaaaattgacgctattacattattatctact
tattgggcagttattcaacaacagcaatcacaattatggggtgatatccaaatacattct
gcattactatttccgatatctgtttctgtccttccattcaataatgtgatttaccttaat
gaaacaatccctagagttgctacagatgagaatattaataaattcacagaagccatcaat
aagcataatttagagaagattaatgagaaatttcctgattttcttaatatgctaaaagaa
tatggtaacggatgttactatggtaatgagaaaataacaactataatttctaagttattt
aggagaatagaaacctacaaaaacaaagaactttcaagagataattgtcaaaaattatat
aatgaattgaacccatcaaataagattttaaattcccttttattaagcaaagacctttgt
cttccggagatatcaggtactacaagaactgaacaattaatttattcgttgactgaagtg
gataaccatgctataatcgatcaaagaagacatgatttcaaggatttaaaggttttctgc
atcgatgaaaaaactgcgcatgagattgacgatggtgtatcggttttaaggaaagatggt
aacatcacaagacttttcattcatatcgctgatccggcatcattatttccattacataat
accattgaaaataattctacatcagacgaaattttaaatattgcatttaggagagctttc
actacgtatttaccggagtttgttttaccaatgcttccaaaaagtttttgtactaaatct
gatttaggtaatactggtaaaatgacaaataccattactttttcggtagattttgacaaa
agtagttgttcaatattagaagacacttttgaaatccaattaggtaaagtcaataatttc
ccgaagaacacaacatataaagaagttgacaaaatattaaatagcagcattaaaagagaa
aatgatatcgaaagggatttaagagaaatgcgatttatagcaaatcatttgaggaaatgt
agaatcgataattcagctgttatctttggagaaggctttaataaaggagcagtaaatttg
atagaaaagaaacaagatggcgaaaaaagttataaagtaaattttaaggatagcgagacc
actccctctaatattattgtgtcggaatttatgattcttgcaaactcattggctggtaaa
tattttaaaaatcataagataccagcaatttataaaacatataaaggcttaaatatgaaa
ccaaaggcaagtagccaatttaaaaagattttaaatgtcaacaagaaaagactgccatcc
atcaaagaaattagtaaaattggatctttgttaagttcgagcacgtttagttccaagcca
tctattcatgagatgattggcacggatcaatatgccacagtcacttctccattacgtaga
tttcctgatttaattaaccattttcaattgcataggtacttaactaatcaaccactatgt
ttcagccaagagaagttagatgaaatggtttggcatttaatcgaaagggacacaatttta
cgtcactatagtagaaaattcaataaatattggacactgcaatatttgaatgaaaaaata
gagggaaatccattattaagatttgatgtaatggttcaatctgtttctgagaacggaagg
gtccattgcatccttccaaaattatcatacgcgacaggtaccttaaaattaaaaccttct
gcaacaaccatccctgctattggagagattataaagaattgcaaaatagcaaatatagac
tgtttaggaaacagtctcgagtttgctatcgatgaaaaccaagaacacgatagagtgaat
accttcacttga
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