Tetrapisispora phaffii: TPHA_0I00710
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Entry
TPHA_0I00710 CDS
T02235
Symbol
TPHA0I00710
Name
(RefSeq) hypothetical protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TPHA_0I00710 (TPHA0I00710)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0I00710 (TPHA0I00710)
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0I00710 (TPHA0I00710)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0I00710 (TPHA0I00710)
Enzymes [BR:
tpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TPHA_0I00710 (TPHA0I00710)
Messenger RNA biogenesis [BR:
tpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TPHA_0I00710 (TPHA0I00710)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
90S particles
RNase
TPHA_0I00710 (TPHA0I00710)
Prokaryotic type
rRNA processing factors
TPHA_0I00710 (TPHA0I00710)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TPHA_0I00710 (TPHA0I00710)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_3_N
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Gpi1
CRAL_TRIO
Motif
Other DBs
NCBI-GeneID:
11534475
NCBI-ProteinID:
XP_003687011
UniProt:
G8BXE9
LinkDB
All DBs
Position
9:143903..145363
Genome browser
AA seq
486 aa
AA seq
DB search
MGSTQKRDSEHLQDTFSSVHKKSKKIVVNNKDDGNIEAEDDNVGAHAFSETILKVSDITQ
LEHAVTKLLESFQTIIQLAPNFKCFQEDYKQLEKIPVSLLPSYSRYQLKLASELKSLYEL
EKVPILNDLYNYEENYNQATGTKSYLKDLTDIDIEKLSNKYTVKDPDADKASFPNDDEED
ENNEADDKKSQKKSSWPPKIPEIKNPAIRAKVFTHKSIVKDKLYLKETEMVNTHNERLEF
LGDSILNTVITMILYNKFPTFSEGQLSSLRRHLVSNECIKKWSYLYDLPGNLKTNLETEQ
DKLNFHYGHKKIHADVFEAYIGGLIEDDPKHNMPKVRKWLSKLAKPIIDELTKKDISLQQ
PDNLNLNAKKELYSLIGYASLNLHYETTKKASYDSPICIVQCITGDGTVLGTGKGRNAKM
AGINAAQNVLDNRELVEEYAKRRAAIPREDSRIKGARGDHKDNQEKEIEKPKITLTEDGE
FKFVLQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggatccactcaaaagagagattctgagcatttacaagatacattttcttctgttcac
aagaagagcaagaaaattgtggtaaataataaggatgatggaaatattgaggcagaggat
gacaatgtaggtgcacacgcatttagtgaaactattttgaaagtatctgatattacacaa
ttggagcacgccgttacaaaattattagaatcatttcaaactattatacaattggcacca
aatttcaaatgtttccaagaggattacaaacagctggaaaagatacctgtgtccctgtta
ccatcgtattccagatatcaactaaaattggcaagtgaactgaaatcattgtacgaatta
gagaaggtaccaattttgaatgatttatataattatgaggaaaactataaccaagcaact
gggactaagtcatatttgaaagatctgacagatatcgatattgaaaagttatcgaacaag
tatacagtaaaagatcctgatgctgataaagcatcttttcccaacgatgatgaagaggac
gaaaacaacgaagctgacgacaagaaatctcagaagaaatcgtcatggcctccaaagatt
cctgaaattaaaaatcctgctatcagagctaaagtatttacccacaaatctattgttaag
gataaattgtacctaaaagaaactgaaatggtaaatactcacaatgaaagactggaattt
ttgggtgactccattttaaacaccgtcattaccatgattttatacaataaatttccaaca
ttttcagaaggacaactgtctagtttaagaagacacttggtaagcaatgaatgtattaaa
aaatggagttatctatatgacttaccaggaaatttaaagacaaatttagaaactgaacaa
gataaattaaattttcattacggccataaaaaaatacatgctgatgtatttgaagcatat
attggtggtttaatagaggatgatccaaagcataatatgccaaaagttagaaaatggtta
tccaaattagctaaacctataatagatgagctaacaaaaaaagatatcagtttgcaacaa
cctgacaatttaaatctaaatgccaagaaagagttgtattctttaattgggtatgcatca
ttgaatcttcattatgaaacaactaaaaaagctagctatgatagtccaatttgcatagta
caatgtattaccggcgatggtacagttctaggtactggtaaaggtagaaatgcaaaaatg
gctgggattaatgctgcacaaaatgttttggataatagggaattggtagaagaatatgca
aaacgcagagctgctatcccaagagaagattctcgtattaaaggcgccagaggagatcat
aaagataaccaagagaaagagatagagaaacctaaaataacgttaactgaagacggtgaa
tttaaatttgtgttacaataa
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