KEGG   Tetrapisispora phaffii: TPHA_0I01880
Entry
TPHA_0I01880      CDS       T02235                                 
Symbol
TPHA0I01880
Name
(RefSeq) hypothetical protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    TPHA_0I01880 (TPHA0I01880)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpf03021]
    TPHA_0I01880 (TPHA0I01880)
   03036 Chromosome and associated proteins [BR:tpf03036]
    TPHA_0I01880 (TPHA0I01880)
Transcription machinery [BR:tpf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     TPHA_0I01880 (TPHA0I01880)
   Coactivators
    SAGA/TFTC/STAGA complex
     TPHA_0I01880 (TPHA0I01880)
Chromosome and associated proteins [BR:tpf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     TPHA_0I01880 (TPHA0I01880)
    STAGA complex
     TPHA_0I01880 (TPHA0I01880)
    TFTC complex
     TPHA_0I01880 (TPHA0I01880)
    SAGA complex
     TPHA_0I01880 (TPHA0I01880)
    SLIK complex
     TPHA_0I01880 (TPHA0I01880)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 TFIID_NTD2 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_HPS5 Ge1_WD40 nos_propeller VPS8_N DnaG_helical Beta-prop_SPT8 Beta-prop_VPS8
Other DBs
NCBI-GeneID: 11534383
NCBI-ProteinID: XP_003687126
UniProt: G8BXR4
LinkDB
Position
9:complement(418620..421724)
AA seq 1034 aa
MSRVNGNTGKDVNNVADKYIAGSSMAGMNNLPSKTVPGKRIPNKMVPSKTVPGKRIPGKS
IPGKTIAGKTVVGNSMVQNNPSMPNANKIRGDNTTPADKNFTLQANNPNVNDKVRQGNTI
NNNKNNNARNNNMENNQSQLHSQYPSNDINRLLLEFLNKKGFHRMEVMLRTESSRTLTPH
NYNSPALPKYSNFISPEENSQLLSKYKSTIRPVTNPYQSTPTKRDSEGNPIRNKSGDSIN
VDDYRTYLRSFILLKNWISKSLSIHKPILTDLVLYPVFVIMLIKFYRLKNIEILKKFYEE
NVKLVIGESNKLIIINLYDDLIKSSNDNLEDEKKEKTNEFDQYNFQISISQQLFFSLISH
LMNNYKLGGQIILGCIFSRIEVQLVQSLKNNSIELVKHNHENETKDSKQVQSDHTFENLS
KEGEEISKTEASEKLENESGNDLNIKADKENDEAATDENIQDDDIADKDEKVKSEIQVDE
KTSNSEVKVNEDDRNSPINNDKKVNSGEKGEQRPMKEPKSEGNANLNPNNEKNAAPEDQN
EAHTSLQRSKEDLEKESESRVLENELNDKHRMQVDDNKEKENAEKENKDTLTESLPSSSD
LQDEMNGANQVNDNTEDVVNVKKSPNSLEQSVYIQDKEDPSNDNSNATVNLNTKTATKES
IKSTISVSKLQGKIKKFQELAKSLHYLGCQTSLPSVSMYTYTNTEKNMSSLDFSSDYTLA
ATGFQDSYIKIWSLEGTSINENEQNYSQINSIFKTLVGHSDAVYSVNFSPCNRFLLSGSG
DKTARLWSTDTYKGLVSYKGHEKPIWDVNFSPTGNNLFATASSDNTARVWSCDRVYPVRI
LAGHLSDVDCVSFHPNGQYVFTGSSDKTSRMWDLSSGDSVRLFIGHSSAVTATAVSPDGR
WLSTANEDGTITVWDIGSGKKLKSMRGHGKNSIYSLSYNKTGNILVSSGADNSVRVWDIK
KNTHEPSLEPEEIYPGLGNDNVTSMNQDIKEYGRRRTIVATNDLMATYFTKKTPVYKVKY
TSANLLLAGGASIA
NT seq 3105 nt   +upstreamnt  +downstreamnt
atgtcccgagtgaacggaaatacgggtaaggacgtcaacaatgttgctgataaatatata
gctgggagttcaatggcaggaatgaataatctcccttcaaaaacagttcctggcaaacgg
attccaaataaaatggtaccaagtaagactgtgcctgggaagcgcataccaggaaagagt
attccaggtaagactatcgcaggcaagactgtggtagggaactcaatggttcaaaataat
ccgtcaatgcccaatgcaaataaaattagaggcgataatactactcctgctgataagaat
tttacactacaggcaaataatccaaatgttaatgacaaggttagacaaggaaacaccatc
aataacaacaaaaacaataatgcaaggaataataacatggagaacaaccaatcccaactc
catagccaatatccttctaatgatatcaatagattactattggaatttctaaacaaaaag
gggtttcatagaatggaagtgatgttaagaacagagagttcaagaactttaacaccacat
aattacaattctccagcattacctaaatactctaattttatctcaccagaagagaattca
cagctcctttcaaaatacaagtcgacaattagaccggttacaaatccgtatcaatcaact
cccacaaagagagattcggaaggtaatccgattcgcaataaatcaggcgattctattaat
gtagacgattatagaacatatcttagaagttttatcttactgaaaaattggatttcaaaa
agtttatcaattcataaaccaattctaactgatttagttttatatccagtatttgtcatt
atgttgataaaattttacagattaaaaaatattgaaatattgaagaaattttatgaagaa
aacgttaaattagtcattggagaaagtaataaattaataataataaatctatatgacgat
ttaattaaatcatccaatgataacttagaagatgaaaaaaaagaaaaaaccaatgaattc
gatcaatataatttccaaatttccatatcacaacagttgtttttttctctaatatcacac
ttaatgaataattataaacttggtggccagattattctgggttgtatttttagtagaatt
gaagttcaattagttcaatcgttaaagaataattcaattgagttagtgaagcataatcat
gaaaatgaaactaaagactctaaacaagtccaatcagaccatactttcgagaatctttca
aaagagggagaagaaatatccaaaacagaagcttctgaaaaactagagaatgagagtggt
aacgaccttaacatcaaagctgataaagagaacgacgaagcagctacagacgaaaatatt
caagacgatgatattgctgataaagacgaaaaagttaaatctgaaattcaggtggatgaa
aaaactagcaattctgaagtaaaagtgaacgaagatgataggaattctccaattaataat
gacaagaaagtgaacagtggtgaaaagggagaacaacggccaatgaaagaacctaagagt
gaaggcaatgctaatttaaacccaaacaatgaaaaaaatgcagctcctgaagatcagaat
gaagctcatacatctttgcagagatcaaaagaagacttggagaaggagtctgagtctaga
gttttagaaaacgaattgaatgacaagcacagaatgcaagttgatgataataaagaaaaa
gaaaatgcagagaaggaaaacaaggatactctaacagaatcactaccatcatcctctgat
cttcaagatgagatgaatggggcaaaccaagtaaatgataatactgaagatgtagtcaat
gtgaaaaaatctccaaactctcttgaacagtcagtgtatattcaagataaagaagaccct
tcaaatgataattcgaatgccactgtgaatctgaatacaaaaactgcaacaaaagagtcc
ataaaatcgacaatttctgtatcgaaacttcaaggcaaaataaaaaaattccaagaatta
gcaaaatcattacattatctaggctgtcaaacttcactcccaagtgttagcatgtatact
tatactaatactgaaaagaatatgtcatctcttgactttagcagtgattatacactagcg
gctacaggatttcaagacagttacataaaaatttggtctttggaaggtacttcaattaat
gaaaatgaacagaattatagtcaaatcaattcaatatttaaaactttggttggtcattcc
gatgctgtatattccgttaatttcagtccatgtaatagatttttactttctggttctgga
gataaaactgcaagactttggtctacggacacgtataaaggattagtgtcatataaaggc
catgaaaaaccaatttgggatgtgaacttttcacctactggtaacaatttatttgccaca
gcctcgagtgataatactgcaagagtatggtcatgcgatcgtgtataccctgttaggata
ttagctggtcatttgagtgacgttgattgtgtttcttttcatccaaatggccagtatgta
tttacaggttccagcgataagacaagcagaatgtgggatttaagcagtggtgactcagtc
agattatttatcggacactcttctgctgttacggcaactgcagtttcaccggatggcaga
tggttgtctacagccaatgaagatggtaccattactgtttgggatattggaagtggaaaa
aagctaaaaagcatgcgtggtcatggtaagaattctatctattcattatcttataacaag
actggtaatattttagtaagttctggtgctgataattctgtaagagtttgggacattaag
aaaaatacccatgagccaagtttagaaccagaggaaatatatccaggattagggaatgac
aacgttacatctatgaatcaagacatcaaagaatatggtagacgcagaacaattgtggct
accaatgatttgatggccacctatttcactaaaaaaacgcctgtatataaagttaaatat
acttcagcaaatctattattagctggtggagcatcaattgcttaa

DBGET integrated database retrieval system