Tetrapisispora phaffii: TPHA_0I03220
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Entry
TPHA_0I03220 CDS
T02235
Symbol
TPHA0I03220
Name
(RefSeq) hypothetical protein
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03030
DNA replication
tpf03410
Base excision repair
tpf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPHA_0I03220 (TPHA0I03220)
03410 Base excision repair
TPHA_0I03220 (TPHA0I03220)
03420 Nucleotide excision repair
TPHA_0I03220 (TPHA0I03220)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0I03220 (TPHA0I03220)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0I03220 (TPHA0I03220)
Enzymes [BR:
tpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPHA_0I03220 (TPHA0I03220)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
TPHA_0I03220 (TPHA0I03220)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
TPHA_0I03220 (TPHA0I03220)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
11532855
NCBI-ProteinID:
XP_003687257
UniProt:
G8BY45
LinkDB
All DBs
Position
9:710752..713037
Genome browser
AA seq
761 aa
AA seq
DB search
MFSSGNVLPVKIQPPLLRPLAYRVLSKKFGLNIKSDGLAELAEFIGNAFGMEWKKSSETV
LFLEQFATVWKQQERGLFIDSTGTKSVISEIKERSKSRIKVRDEPDLGPAQEPKKAKTLD
NFLLKNVLQQKNVEVTKQETDSEDIPMDDGIEIISEHTSLSNNGTGIEMSDGIETSDGIV
IKEEEVQDITDVDPISNYSIPQIEPIEQIEAEEVTEDEMEQLNWRDYFKIINVDEQQNFS
YNPRKLQFIFKPSFKKPHSNHNSEIINNSNLKLQLPDIQSKLAIFSTRYYLLRDRIMRNE
AFQNNDSFNPLSSMVNMKNALQNNDKSELISNMSLTPIKTLLGRNGQNFLILGMLRVNAK
GNWCLEDPSGDIEVDLSQTLPTAGLYYVPGAIVLTEGIYYSATNTFHVTSMTHPPCERRD
VTLEAIGNIDLLGIHGISTPNYIAKLDDDLKIRLHYLEKDFTDHRFAIMGGDMFLNELQT
LSALRKVFSKLNEDPPIMIILQGSFSSTPVHASTNSKSMSISTQYKNNFDSLASLLSEFE
DLINYSTFLFIPGVNDPWSSMVTLGSTGLWPQKPIPNHFTTRINRICRHVIWGSNPTRIA
YLSQEIVIMRDNICGRFKRNSVQFRTVEEKEGINKQLKKDNEKSQLLDDDDIPMKSLSID
PNKLPARVHESRKIVKTILDQGHLSPFTPDIRPIAWGLDHSLTLYPIPSTLILCDQTAPQ
FELTYNGCKAFNPGKFISNNRARFLAYTPSLKKVQEEELYF
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttctgggaatgtgttaccagtgaagatccagcctccgttgttgagaccgttg
gcataccgtgtgctatccaagaagtttggactgaatatcaaatctgatgggttggcagag
ttagcagagtttattggaaacgcttttggaatggagtggaagaaaagttcggaaactgtc
ctttttttagagcaattcgctaccgtctggaagcaacaagaacgaggtttgttcattgac
tctactggtacaaaaagtgtaatctctgagattaaagaaagaagtaaaagtaggataaaa
gttagagatgagcctgatctggggcctgcacaagaaccgaagaaggcaaaaactttggat
aattttttgttgaaaaatgttcttcaacaaaagaatgtggaagtaacaaagcaagaaaca
gattcggaagatatcccaatggatgatgggattgaaataattagtgagcacacttctctg
tctaacaatggtacgggaattgaaatgtcagatggaatcgaaacgtcagatggaattgta
ataaaagaagaagaagttcaagatatcactgatgtggaccctatttcaaattattcaatc
cctcaaattgaacccattgaacaaatcgaagcggaagaggtgactgaggatgaaatggag
caactaaactggagagattattttaaaattattaatgtagatgaacaacaaaacttctca
tataacccaagaaagttgcaattcatattcaaaccgagttttaaaaaaccacattcaaat
cacaactcagagataataaataattcaaatttaaaactacaattaccggatattcaatca
aaattagcaatcttttcaacaagatactacctacttagagatagaataatgagaaatgaa
gctttccaaaataatgattctttcaatcctttatcctcaatggtaaatatgaaaaatgcc
ttacaaaataatgataaatcggaactaatatctaacatgtccctaactccaatcaaaaca
ttacttggtagaaacggccaaaatttcttgattttaggtatgcttcgagtaaacgccaag
gggaattggtgtttagaagacccctctggtgatattgaagttgatctatcgcaaacactt
cctacagccggtttatactatgtgccgggtgcaatcgtattaactgaaggtatatattat
tcagcaacaaatacatttcacgttacatctatgacacaccctccttgtgaaagaagagat
gttacattggaagcaattggtaacatcgatttattaggtattcatggaatttctactccg
aattatattgcaaaactggatgacgatttaaaaatcagactacattatttggaaaaagat
tttacagatcataggttcgctatcatggggggtgatatgttcttaaatgaattacagaca
ctatctgcattgagaaaagttttttcaaaacttaacgaagatccacctattatgattatt
ttacaaggttctttctcaagcacaccggtgcatgcatccacaaatagtaaaagcatgagc
atcagcactcaatacaaaaataattttgatagtctagcatcattattatctgaattcgaa
gatttgattaattattcaactttcctttttatccctggtgttaatgatccctggagttcc
atggtaactttaggttcaacaggtttatggcctcaaaagccaattccaaatcactttact
acaagaataaacagaatatgtagacatgtaatttggggatcaaatccaacaagaattgca
tacctgtctcaagaaatcgttataatgagagataatatttgtggaagatttaaaagaaat
agcgttcaatttcgaacagtagaggaaaaagaaggtattaataagcaattaaaaaaagac
aatgaaaaatcacaattactggatgatgatgatattccgatgaagtccttgtccatagac
ccaaacaagctaccagccagggtacatgaatctaggaaaattgtaaaaactattttagat
caaggtcatttatcaccgttcacacctgatattagaccaatagcatggggtttagaccac
tctttaacattatacccgattccatcaacactaatactatgtgatcaaactgcaccacaa
tttgaacttacatataacggttgtaaagctttcaatccaggaaagtttataagtaacaat
cgtgcaagattcctagcttatacaccatcattgaagaaggttcaagaggaagaattgtat
ttctag
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