KEGG   Tetrapisispora phaffii: TPHA_0I03240
Entry
TPHA_0I03240      CDS       T02235                                 
Symbol
TPHA0I03240
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TPHA_0I03240 (TPHA0I03240)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpf03041]
    TPHA_0I03240 (TPHA0I03240)
Spliceosome [BR:tpf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    TPHA_0I03240 (TPHA0I03240)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_IFT122_1st WD40_like MIOS_WD40 DUF1151 NUP50 WD_LRWD1
Other DBs
NCBI-GeneID: 11532857
NCBI-ProteinID: XP_003687259
UniProt: G8BY47
LinkDB
Position
9:714446..715879
AA seq 477 aa
MEEKKGILLEDLEIDLDHIPISNQDKTSINDKLSKIKIQRHGRIFDIPTDDIQIMEILKR
LGVEGTLPNENARLRRERLIGIISDDLTLFKKFEGHMKELDTTNANNTLSDDDGDEEEEE
EFYTVADDDLIKARKLILQYSITNSMKRIKLEKELANNFNWKNVLASKRNLKTGLKRYEL
TGSQVIAERPVSVVKLAPQSKLLASGSWDGAISIVDNMNLERKTHFQAAHVGKIGGIEWS
NDEAYLFTGGEDCLVKVFGYEKNDLTSIDTLKGHQGRVSDVKLHPLGKYLGSSSFDNTWR
LWDIEKKKEILLQEGHSKEIFSLAFHTDGSLTATAGFDSIGMIWDLRSGKNIMNLIGHAK
PIYSLDWAPNGYQLATGSGDGTIKIWDLRNKESNCASIFAHKNLVTSVQYEKNNGGFVFS
AGYDKLIKIHDSKTYESVATLEGHTEKILTLDTSPISNLIVSSGWDRTVKIWDNDNI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggaagagaagaaaggtattctattggaagatttagaaattgatttggaccacatccca
atatcaaatcaagataaaacaagcataaatgacaagctaagtaaaataaaaattcaaaga
catggtagaatttttgacataccaactgatgatatacaaattatggaaatattaaaaaga
ttaggtgttgagggaacattaccaaatgaaaatgctagacttagaagagagagattaatt
ggaattatatccgatgatttgacattgttcaagaagtttgaggggcatatgaaggaatta
gatacaactaacgcaaataatactttgagtgatgatgatggcgatgaagaagaagaagaa
gaattttatactgttgctgatgatgatctgataaaagcgaggaaattgattcttcaatat
tcgataacaaattccatgaagagaattaaactagagaaagaattagcaaataactttaat
tggaaaaatgttttagcttcaaaaagaaacttaaaaacaggattgaaacgatatgaatta
acaggatctcaagttatagcagaaaggcctgtatcagtggtcaaacttgctcctcaaagt
aaattgcttgcgtcaggtagttgggatggtgcaatttcaatagtagataatatgaatttg
gaaagaaaaacacattttcaagctgcgcatgtgggtaagattggtggaattgaatggtct
aatgatgaagcttatctttttactggtggagaagattgtttggtgaaagtgtttggttac
gaaaagaatgacttgacctcaattgacacattaaaaggacaccaaggaagagtgtcagat
gttaaattacatccactggggaagtatctcggcagttcatctttcgataatacttggagg
ctttgggacatcgaaaagaaaaaagaaatattgttacaagaaggtcatagtaaagagatt
tttagtctagcatttcatacagatggttctctaacagctactgcaggatttgattcaata
ggaatgatttgggatttaaggtcaggtaaaaatataatgaatttaattggacatgcaaaa
cctatatattcattggattgggcaccaaacggttaccaacttgctacgggaagtggagat
ggtaccataaagatctgggatctaaggaataaagagtcaaactgtgcctcaatatttgct
cataagaatctagtcacaagtgttcaatatgaaaaaaacaacggtggtttcgtattttct
gctggatatgacaaacttataaaaatacatgattctaagacatatgaatctgtagcgact
ttggaaggacatactgagaaaatattaacacttgacacttcaccaatatcaaacttgatc
gtatccagtggatgggacagaactgtaaaaatttgggataatgataacatataa

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