Tetrapisispora phaffii: TPHA_0I03240
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Entry
TPHA_0I03240 CDS
T02235
Symbol
TPHA0I03240
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TPHA_0I03240 (TPHA0I03240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpf03041
]
TPHA_0I03240 (TPHA0I03240)
Spliceosome [BR:
tpf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TPHA_0I03240 (TPHA0I03240)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_Vps41
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_IFT122_1st
WD40_like
MIOS_WD40
DUF1151
NUP50
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
11532857
NCBI-ProteinID:
XP_003687259
UniProt:
G8BY47
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All DBs
Position
9:714446..715879
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AA seq
477 aa
AA seq
DB search
MEEKKGILLEDLEIDLDHIPISNQDKTSINDKLSKIKIQRHGRIFDIPTDDIQIMEILKR
LGVEGTLPNENARLRRERLIGIISDDLTLFKKFEGHMKELDTTNANNTLSDDDGDEEEEE
EFYTVADDDLIKARKLILQYSITNSMKRIKLEKELANNFNWKNVLASKRNLKTGLKRYEL
TGSQVIAERPVSVVKLAPQSKLLASGSWDGAISIVDNMNLERKTHFQAAHVGKIGGIEWS
NDEAYLFTGGEDCLVKVFGYEKNDLTSIDTLKGHQGRVSDVKLHPLGKYLGSSSFDNTWR
LWDIEKKKEILLQEGHSKEIFSLAFHTDGSLTATAGFDSIGMIWDLRSGKNIMNLIGHAK
PIYSLDWAPNGYQLATGSGDGTIKIWDLRNKESNCASIFAHKNLVTSVQYEKNNGGFVFS
AGYDKLIKIHDSKTYESVATLEGHTEKILTLDTSPISNLIVSSGWDRTVKIWDNDNI
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagaaaggtattctattggaagatttagaaattgatttggaccacatccca
atatcaaatcaagataaaacaagcataaatgacaagctaagtaaaataaaaattcaaaga
catggtagaatttttgacataccaactgatgatatacaaattatggaaatattaaaaaga
ttaggtgttgagggaacattaccaaatgaaaatgctagacttagaagagagagattaatt
ggaattatatccgatgatttgacattgttcaagaagtttgaggggcatatgaaggaatta
gatacaactaacgcaaataatactttgagtgatgatgatggcgatgaagaagaagaagaa
gaattttatactgttgctgatgatgatctgataaaagcgaggaaattgattcttcaatat
tcgataacaaattccatgaagagaattaaactagagaaagaattagcaaataactttaat
tggaaaaatgttttagcttcaaaaagaaacttaaaaacaggattgaaacgatatgaatta
acaggatctcaagttatagcagaaaggcctgtatcagtggtcaaacttgctcctcaaagt
aaattgcttgcgtcaggtagttgggatggtgcaatttcaatagtagataatatgaatttg
gaaagaaaaacacattttcaagctgcgcatgtgggtaagattggtggaattgaatggtct
aatgatgaagcttatctttttactggtggagaagattgtttggtgaaagtgtttggttac
gaaaagaatgacttgacctcaattgacacattaaaaggacaccaaggaagagtgtcagat
gttaaattacatccactggggaagtatctcggcagttcatctttcgataatacttggagg
ctttgggacatcgaaaagaaaaaagaaatattgttacaagaaggtcatagtaaagagatt
tttagtctagcatttcatacagatggttctctaacagctactgcaggatttgattcaata
ggaatgatttgggatttaaggtcaggtaaaaatataatgaatttaattggacatgcaaaa
cctatatattcattggattgggcaccaaacggttaccaacttgctacgggaagtggagat
ggtaccataaagatctgggatctaaggaataaagagtcaaactgtgcctcaatatttgct
cataagaatctagtcacaagtgttcaatatgaaaaaaacaacggtggtttcgtattttct
gctggatatgacaaacttataaaaatacatgattctaagacatatgaatctgtagcgact
ttggaaggacatactgagaaaatattaacacttgacacttcaccaatatcaaacttgatc
gtatccagtggatgggacagaactgtaaaaatttgggataatgataacatataa
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