Tetrapisispora phaffii: TPHA_0J01230
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Entry
TPHA_0J01230 CDS
T02235
Symbol
TPHA0J01230
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03013
Nucleocytoplasmic transport
tpf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TPHA_0J01230 (TPHA0J01230)
03015 mRNA surveillance pathway
TPHA_0J01230 (TPHA0J01230)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0J01230 (TPHA0J01230)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TPHA_0J01230 (TPHA0J01230)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TPHA_0J01230 (TPHA0J01230)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_30
AAA_22
ChaB
Motif
Other DBs
NCBI-GeneID:
11533028
NCBI-ProteinID:
XP_003687379
UniProt:
G8BYK3
LinkDB
All DBs
Position
10:complement(289735..291210)
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AA seq
491 aa
AA seq
DB search
MSEDKKDAASLLASLKIDADNNSSEDKNVKEIKEADNEPKVVAESKTIIEDKFAGKDADK
SGDDKKTKEETDSSLVKSEYEVTVKLADLQADPNSPLFSAKSFEELGLEPELLKGLYAMK
FQKPSKIQERALPLLLSNPPRNMIAQSQSGTGKTAAFSLTMLSRVDQTVELPQAICLAPA
RELARQTLEVIQEMGKFTKITSQLVVPDSYEKNKGINAQIIVGTPGTVLDLMRRKMLNVS
RVKVYVLDEADNMLDKQGLGDQCIRVKKFLPKTAQLVLFSATFDEAVREYAKKVVPSANT
VELQRNEVNVSAIKQLYMDCDNETHKYEVLTELYGLLTIGSSIIFVSTKKTANLLYGKLK
QEGHQVSILHGDLNSSDRDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDLPTTL
NGEADPATYIHRIGRTGRFGRKGVAISFVYDKQSFRVLSNIKKYFGDIEMTRVPTDDWDE
VETIVKKVLKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggataagaaagacgcagccagcttactggcatcattaaaaattgatgctgac
aacaactcatctgaagataaaaatgtcaaagagataaaagaagctgataatgaaccaaag
gttgtagctgaatcaaagaccatcatagaagataaatttgccggtaaggatgctgataag
agcggagatgataagaaaaccaaggaagaaactgattctagtttggttaaatctgaatat
gaagtcactgtcaaattagctgatcttcaagctgatcctaattctccattgttcagtgcc
aaatcctttgaagaattaggtctggaaccagaattattaaaaggtttatatgcaatgaag
tttcaaaaaccatctaaaattcaagaaagagcattaccactactattaagcaatccacca
agaaatatgatagctcaatcccaatcgggtaccggtaaaacagcagctttttctttaacc
atgttgagtcgtgttgatcaaactgtagagttaccacaggctatatgtttagctcctgcc
agagaattggctagacaaacgttggaagttatccaagaaatgggtaaatttacaaaaatt
acttctcaattagttgtcccagattcttatgagaagaataaaggtatcaatgcacaaatt
attgttggtacccctggtacagttttagatttaatgcgtagaaaaatgttaaacgtcagc
cgtgttaaagtatacgttttagatgaagccgataacatgttggataagcaaggtttaggt
gatcaatgtattcgtgttaagaaatttttaccaaaaactgctcaattagtattattcagt
gctacttttgatgaagctgttagagaatatgccaaaaaggttgtaccatcggcaaacaca
gtagaattgcaaagaaatgaagttaatgtcagtgcaatcaaacaattatacatggattgt
gataatgaaactcacaaatatgaagtgttaacagagttatatggtttattgacaattggt
tcatcgatcatttttgtctctacgaagaaaactgctaatctattatacggtaaattaaaa
caggaaggtcatcaagtttctatattgcatggtgatttaaatagtagtgatagagataga
ttaattgatgatttcagagaaggaagatcgaaagtcctgatcactactaacgtattagct
cgtggcattgatattccatctgtttcgatggtagtcaattacgatttacctactaccttg
aatggtgaagcagacccagctacatatatccatagaatcggtagaacaggtagatttggt
agaaagggtgttgccatttcatttgtctatgacaaacaatcattccgtgtcttatccaac
atcaagaagtatttcggtgatatagaaatgactcgtgttccaactgatgattgggatgaa
gtcgaaactattgtaaagaaagtattgaaagaataa
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