Tetrapisispora phaffii: TPHA_0J02060
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Entry
TPHA_0J02060 CDS
T02235
Symbol
TPHA0J02060
Name
(RefSeq) hypothetical protein
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TPHA_0J02060 (TPHA0J02060)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tpf03021
]
TPHA_0J02060 (TPHA0J02060)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0J02060 (TPHA0J02060)
Transcription machinery [BR:
tpf03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
TPHA_0J02060 (TPHA0J02060)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
TPHA_0J02060 (TPHA0J02060)
RSF complex
TPHA_0J02060 (TPHA0J02060)
WICH complex
TPHA_0J02060 (TPHA0J02060)
B-WICH complex
TPHA_0J02060 (TPHA0J02060)
NORC complex
TPHA_0J02060 (TPHA0J02060)
BRF complex
TPHA_0J02060 (TPHA0J02060)
NuRF complex (fruit fly)
TPHA_0J02060 (TPHA0J02060)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
HDA2-3
DEAD
ERCC3_RAD25_C
SWI2_SNF2
AAA_14
Motif
Other DBs
NCBI-GeneID:
11533039
NCBI-ProteinID:
XP_003687460
UniProt:
G8BYT4
LinkDB
All DBs
Position
10:complement(459339..462566)
Genome browser
AA seq
1075 aa
AA seq
DB search
MPSRDPEENKKRYLLSNDKHNHFDTEATAKRFEHLLSLSGLFRHFIETRAQTDEKFKKVL
DIVDIEIAKKAAKSVHQDKRRRKTEKEEDAELLKGGDIDEEDNEALDDVEFQFRESPSYV
DGTLRPYQIQGINWLISLYKSGLSGILADEMGLGKTLQTIAFLGYLRYIEKKPGPYLVIA
PKSTLNNWLREINKWTPEVNAFILQGDKEERAGLIQKKLVGCDFDIVVSSYEIIIREKSA
FRKIDWEYIVIDEAHRIKNEESMLSQVLREFKSRNRMLITGTPLQNNLHELWALLNFLLP
DIFSNAQDFDDWFSNEGSEDDQDKVVKQLHTVLQPFLLRRIKSEVETSLLPKKELNVYVG
MSTMQKKWYKQILEKDIDAVNASSGNKESKTRLLNIVMQLRKCCNHPYLFDGAEPGPPYT
TDEHLVYNSAKLKVLDKLLKKFKEEGSRVLIFSQMSRLLDIMEDYCYFRNYNYCRIDGST
AHEDRIQAIDDYNAPDSDKFLFLLTTRAGGLGINLTSADVVILFDSDWNPQADLQAMDRA
HRIGQKKQVKVFRLVTDNSVEEKIIERATQKLRLDKLVIQQNRSGAKKKESQGDQKDALL
SMIQHGAADVFKQTSSGNVSGTSSDRNTPNPEGNGEDKDSEFDLDALIASSEDKTKMLNK
KYDKLGLDDLQRFNQDSAYEWNGTDFKKKVVQKDIISPTWFNPTKRERKENYNIDGYYKD
VLQTGRSSTPAQPRMPRPHAFHSHQLLSPKLKVLYEKERMWTAKKTAYTPNMDDVKSTYG
DIEDESERKQKLALLKLSVQNAQPLTEEEEAEKIELEKEGFSNWGKLEFRKFISLSGKYG
RNSIQAIAMELAPGKSVEEVREYAKAFWANIERVDDYEKILKTIEMEEDKIKRIKFQQEA
LRRKISQYTNPLFDLVLKHPPSSSNKRTYSEEEDRFIMLMLFKYGLDRDDLYERVRDEIR
DCPLFELNFYFQSRTPIELTRRGNTLLQCLEKEFNDGIILTDENKKRIADEDIEGEKVKE
EIKKEEAGAAKAQSEVKAEAGTEIETAELKKRPLEEPLLQNGGEKEEEVNKKAKV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgccttccagggatcctgaggagaataagaagcgttatcttttatcaaacgacaagcat
aaccattttgacacggaagccactgcaaaaagatttgaacatttattatcattaagtggt
ttgtttagacattttattgagactagagcacagactgatgaaaagtttaagaaagtcttg
gatattgttgatattgagattgctaaaaaagctgcaaaatcagttcatcaagataagaga
agaagaaaaactgagaaagaagaagatgcagaattgttaaaaggtggtgatattgatgaa
gaagacaatgaggctctggatgatgttgagtttcaattcagagaatcaccaagttatgtt
gacggtactttaagaccatatcaaatccaaggtattaattggttaatctcgttgtacaag
agtggtttatctggtattttggcagatgaaatgggtttaggtaagacgctacaaacaatt
gccttcctgggttatctaagatacattgaaaaaaaaccaggaccatatttagttattgca
ccaaaatctactttaaacaattggttaagagaaattaataaatggacacctgaagtcaat
gcttttatattacaaggtgataaagaagaaagagctggtttgatacaaaaaaaattagta
ggttgtgatttcgatattgttgtctcttcttatgaaattatcattagggaaaagtcagct
ttcagaaaaattgattgggagtatattgttatagatgaagctcatagaatcaaaaatgag
gaatccatgttatctcaagttttgagagaatttaagtcacgtaacagaatgttgattacc
ggtactccattacaaaataatttacatgaactgtgggctttattgaatttcttacttcca
gatatattttctaacgcacaagattttgatgactggttttcgaatgaaggttcggaagat
gatcaggataaagttgtcaaacaattacacacggttcttcaaccatttttacttcgtcgt
attaagagtgaagtcgaaacatctttgttacctaaaaaggagctaaacgtgtatgttggt
atgtcaactatgcaaaaaaaatggtacaaacaaatcttagaaaaagatatagatgctgtt
aatgcttccagtggtaataaagagtccaaaaccagattattgaacatcgtcatgcagtta
agaaaatgttgtaaccatccttatttatttgatggtgccgaaccaggtccaccatatact
acagatgagcatttagtctataattctgccaagttaaaggttttggataaactattgaaa
aaatttaaagaagaaggttctcgtgtattgatctttagtcaaatgtctagattattagat
attatggaggattattgttattttagaaactacaattattgtagaatagatggttcaaca
gctcatgaagatagaatccaagctattgatgactataacgcaccagattcagataaattt
cttttcttgttaacgactcgtgcaggtggtttgggtattaatttaacttctgctgacgtt
gttattctatttgattctgattggaatccgcaagctgatttgcaagccatggatagagct
catagaattggtcaaaaaaagcaagttaaggtatttagattggttacagataattctgta
gaagagaaaattatcgaaagagctacacaaaaattgagattagataaattagttattcaa
caaaatagaagtggtgcaaagaagaaggaaagtcaaggtgaccaaaaagatgctttgtta
tcaatgattcaacatggtgctgccgatgtgttcaagcaaacctctagtggtaacgtcagt
ggaacttcatctgatagaaacacaccaaatccagaaggaaatggtgaagacaaagacagt
gaattcgaccttgatgctttgattgcatcatctgaagacaagactaaaatgctaaataaa
aaatacgataaattaggtttggatgacttacaaagattcaatcaagactctgcttatgaa
tggaatggtactgattttaagaagaaggtagttcaaaaagatataatcagtccaacttgg
tttaatccaactaagcgtgaacgtaaagaaaactataatatcgatggttattacaaggat
gtcttgcaaaccggtagatcatctaccccagctcaaccaagaatgccaagacctcacgct
ttccactcgcatcaattattatctccaaagttaaaggtactttatgagaaagagcgtatg
tggactgctaaaaaaacggcttacacaccaaatatggatgatgtaaaatccacttacggt
gatatagaagatgaatctgaaagaaagcaaaaattagcattattgaaattaagtgtccaa
aatgcccaaccattaactgaggaagaagaagccgaaaagatagaactagaaaaagaaggt
ttttccaattggggtaaactggaattcagaaaatttatttctttgtcaggtaagtatggt
agaaattctatccaggctattgccatggaattagcacctggtaagagtgttgaagaagtc
cgtgaatatgctaaagcattctgggctaacatagaaagagttgatgattatgagaaaata
ttaaagactattgagatggaagaagataagatcaagagaatcaagttccaacaagaagct
ttacgtcgtaagatttctcaatacaccaatccattatttgatttggttttaaagcatcca
ccatcgtcatctaataaaagaacttattctgaagaagaagacagatttataatgctgatg
ttattcaaatacggtcttgacagagatgatttatatgaaagagtcagagatgaaatcaga
gattgtccactattcgaactaaacttttacttccaaagtagaaccccaatcgaattgact
agaagaggtaatactttactacagtgcctagagaaagaattcaatgatgggataatactt
actgacgaaaacaagaaacgaatcgccgatgaggatatagaaggtgagaaagtgaaggaa
gagattaagaaggaagaagctggggctgctaaagcccaatctgaagttaaagctgaggct
ggaactgaaattgaaactgcagaattaaagaaaaggccattagaagaaccattgttgcaa
aacggtggagaaaaagaggaagaagtgaataaaaaggctaaagtatga
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integrated database retrieval system
