Tetrapisispora phaffii: TPHA_0J03200
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Entry
TPHA_0J03200 CDS
T02235
Symbol
TPHA0J03200
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0J03200 (TPHA0J03200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0J03200 (TPHA0J03200)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TPHA_0J03200 (TPHA0J03200)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
TPHA_0J03200 (TPHA0J03200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
11532965
NCBI-ProteinID:
XP_003687573
UniProt:
G8BY88
LinkDB
All DBs
Position
10:699211..699951
Genome browser
AA seq
246 aa
AA seq
DB search
MSRFEIYSPEGLRLDGRRWNEVRRFECSINTHAHAADGSSYLEQGNNKIITLVKGPKEPS
LRSQANSLKATMDVSVNITRFSKFERSAISHKNERRVLEIQTALLRTFEKNIMLHLYPRT
QISIQVHILQQDGGMFASLINGITLALIDAGIAMYDYVSGISIGLFDTTPLLDVNTLEEN
AMSTVTLGVIGKSEKLSLLSVEDKIPLDRLESVLAIGIAGAHRLRDLMDEELRKHAHKRV
IKASTK
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagatttgaaatttattcaccagaagggttaagattggatggacgtagatggaat
gaggtgcgtagatttgaatgttcaataaacacacatgctcatgcagctgatggttcctca
tacctggaacaaggaaataataagattattactttagtgaaaggcccaaaggaaccttcc
ttacgttctcaagccaattctttgaaggctacaatggatgtatctgttaatataaccaga
ttttctaaatttgaaagaagtgcaattagtcataaaaatgaaagacgtgttttagaaatt
caaactgctcttctgcgtacttttgaaaaaaacatcatgttacatctatacccaagaact
caaattagcatacaggttcatattttgcaacaagatggcggtatgttcgcatctttaatc
aatgggataactttagctctaattgatgcaggtatcgcaatgtatgattatgtgagtgga
atatcaattggtctatttgatacaacccctttattagatgtaaatactttagaagaaaat
gcaatgagtacagttacattgggtgttattggtaaatctgaaaaactatcactattatct
gtagaggataaaataccactagatcgattagaaagtgttttagcaattggtattgctggt
gcgcatagattaagagatcttatggatgaagaactaagaaaacatgcacataagagagtg
ataaaagcttcaaccaaataa
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