Tetrapisispora phaffii: TPHA_0K00300
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Entry
TPHA_0K00300 CDS
T02235
Symbol
TPHA0K00300
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TPHA_0K00300 (TPHA0K00300)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0K00300 (TPHA0K00300)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TPHA_0K00300 (TPHA0K00300)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
11533371
NCBI-ProteinID:
XP_003687598
UniProt:
G8BZ36
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All DBs
Position
11:59882..61705
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AA seq
607 aa
AA seq
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MPVPLSHKYKYTSLFSDICRSRFNHLVTRFIPIIGLLFTLTISILFGSGYPSYFRRIISS
LLYKFPILYLLSLLLVFMRKNYLHVNYDVPSNIITSVFRRLFSIKAIAYLLSNILVIKLF
AVFFQDLLSISLNHILLTIILPATYTIQHVLFDLDRLPFKFEIQHQPPSEYIYKKLKAIV
IKSLILAITIMTVILFGFATLIGKWTLGFYGYVSYFVFTFVTLLYIEFINLSFTAHMIIG
CIHKGKLISSLSATPVETLISGLSSNKSFTKMTAFQELCYRAISMDSSLRTPIYQARLRN
NKIWPAILNECIILTKSNNTAVSQYMLTLQNSLKPASTFKQSSTRDFLTKSSNDEIFGND
KSIRSDGQFDSNGFLFNNNFEANAKISNNQGHPNRIAVRTGDILINNKRDHQTNLNSNKL
FNNTHLFDEPIITHKTKFMLAVQKIWSIYSVQIKKFFTKSQENSESQTLSILETLNISKI
RIAERLVPMPVTQGYCIIALMGLFIHALDEDPKGSIVSSVGDVLKLLERSVGSLGRYADW
KPDYTSNLKNDTKKIKTLDNVSKLYELSINVFLEVVLKYNVLLNDVYLDKDVIILSKWVL
EMCNDEI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgccgttgagccataaatataaatacacttctctatttagtgatatatgcagg
agtagattcaaccatttagtgacaagatttattcccattattggtttattgtttacacta
acaatttcaattttgtttggatctggatatccttcatattttagaagaataatatcctcg
ttactgtataagtttccaatcttatatctattatcattattgcttgtattcatgagaaag
aattacttacatgttaattacgatgttccttcaaatattataaccagtgtatttcgcaga
ctgttctctattaaagcaatagcgtatttactttcaaatatcttggttataaagttattt
gcagtgtttttccaagatttattaagcatttccctaaatcatattcttttaactattata
ttgccagctacatacacaatacaacatgttttatttgatttggatagacttccattcaaa
tttgaaattcaacaccaacctcctagtgaatatatttacaaaaaattaaaagcaattgta
atcaagtcattaatccttgcaattacaatcatgaccgtcatattatttggtttcgcaact
ttaattggaaaatggacattaggcttttatggttatgtctcatacttcgttttcacattt
gtaactctactttacattgaatttattaatttatccttcacagcgcatatgattattgga
tgtattcataaaggtaaattgatatcatcattgtccgcaacaccagttgaaacattaata
agtggattaagctctaataaaagttttacaaaaatgacagcattccaagaattatgttat
agagcgatttccatggattcgtctttgcgaaccccaatatatcaagcacgtttaagaaat
aataaaatatggccggctattctaaatgaatgtattattttaacaaaatctaataataca
gctgtttcccaatatatgcttactttacagaacagcttaaaaccagcatctacattcaaa
caatcaagcaccagagattttctaaccaaatcctccaatgatgaaatttttggtaatgat
aaatcaataagatctgatggacaatttgatagcaatggattcttatttaataacaatttt
gaagctaatgcaaaaatatctaacaaccaaggacatccaaatagaattgcagtgcgaacc
ggagatattttgattaacaataagcgtgatcatcagactaatttgaatagtaacaaactg
ttcaataacacgcacttatttgatgaaccgattattacccataaaactaaatttatgttg
gcagttcagaaaatttggtcaatatacagtgttcaaattaaaaaattctttaccaagtct
caagagaatagcgaatctcaaacgttatcaatacttgaaactttgaatatctcaaaaata
agaatagctgaaagattagtaccaatgccagtaactcaaggatattgtattattgctctt
atgggtttattcattcacgctttggatgaagatccaaaaggtagcattgtatcatcagtt
ggtgatgttttaaaattattagaaagatctgtcggttctttagggaggtatgctgattgg
aaacctgactatactagtaacctcaaaaatgatacgaagaaaatcaaaacgctagataat
gtatctaaactatatgagctatctattaatgtctttttagaggttgtattaaagtacaac
gttttactaaatgatgtttaccttgataaagatgtcattatattaagtaaatgggtattg
gaaatgtgtaatgacgaaatatag
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