Tetrapisispora phaffii: TPHA_0K01890
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Entry
TPHA_0K01890 CDS
T02235
Symbol
TPHA0K01890
Name
(RefSeq) hypothetical protein
KO
K12587
exosome complex component MTR3
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPHA_0K01890 (TPHA0K01890)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0K01890 (TPHA0K01890)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TPHA_0K01890 (TPHA0K01890)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
11533245
NCBI-ProteinID:
XP_003687755
UniProt:
G8BZJ3
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All DBs
Position
11:complement(396606..397316)
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AA seq
236 aa
AA seq
DB search
MNVQDRRRLLGPSNAKPIVFSAATDIQSSEPKKDESSSFILNSGLIENCNGSSLVEIRDP
KVTQHQTSLITSVYGPRATKGSFTSQASLSIQLKNGSSEKYNTTELKEVSSFLVNVFNSV
INLSRYPKSGIDIFIYILYDKVLSEESKKSNNISAILPYCISAITLALINAGIEVDDIAT
AGYYKGDVISFIKNGEEVIGYWKDEGNCESFDVALEHCKTEAQKFKNLITTHILEE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtacaagatagaagacgtttactaggtccatctaatgctaagccgattgtattt
agtgctgctactgacatacaatcatcggagccaaagaaagacgaatcctcaagttttata
ctaaattctggtttaatagaaaattgtaacggttcttctctagttgaaatcagagatcca
aaagtcactcaacatcagacgtctttgattacttcggtttacggtcctagagcaacaaaa
ggttcgtttacatcgcaagcatctctttctattcagttaaaaaatggttcttctgagaaa
tataacactacagaattgaaagaagtctcaagtttcttagtgaatgtttttaattcagtt
ataaatctttcaagatatccaaaatctggtattgatattttcatttatattttgtacgat
aaagtgctctccgaagagtctaaaaaatcaaataatatatcagctattctaccatactgt
atatcagctattactttagcgttaattaatgctggtattgaagttgatgatattgccaca
gctggatattacaaaggagatgtcatttctttcattaagaatggtgaagaagtcataggt
tactggaaagacgaagggaattgtgagagctttgatgtcgcattagaacattgtaaaact
gaggcacaaaaattcaaaaatctaataacaactcatattttagaagagtaa
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