Tetrapisispora phaffii: TPHA_0L01010
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Entry
TPHA_0L01010 CDS
T02235
Symbol
TPHA0L01010
Name
(RefSeq) hypothetical protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03440
Homologous recombination
tpf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TPHA_0L01010 (TPHA0L01010)
03460 Fanconi anemia pathway
TPHA_0L01010 (TPHA0L01010)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0L01010 (TPHA0L01010)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0L01010 (TPHA0L01010)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TPHA_0L01010 (TPHA0L01010)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Topoisomerases
TPHA_0L01010 (TPHA0L01010)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
TPHA_0L01010 (TPHA0L01010)
FA (Fanconi anemia) pathway
TPHA_0L01010 (TPHA0L01010)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
DUF6293_C
Motif
Other DBs
NCBI-GeneID:
11531798
NCBI-ProteinID:
XP_003687892
UniProt:
G8BZY0
LinkDB
All DBs
Position
12:complement(204309..206264)
Genome browser
AA seq
651 aa
AA seq
DB search
MRVLCVAEKNSIAKAVSQILGGGSSIARDSGYMYVKNYDFNFSGFPFADSRDCQVTMTSV
AGHLTGVDFANERYGWGKCAIHELFDAPLSQTLDKNQKKIADNIKREARNADALMIWTDC
DREGEYIGWEILIEAKKGNGSLNESNIYRAVFSHLERSHILHAARNPKRLDMNSVHAVGT
RMEIDLRAGVSFTRLLTETMKPKICPPAVGPNRNKKKENIVISYGTCQFPTLGFVVDRFE
RIRNFIPEEFWYIQLQIANPDPNITTTTPFQWEKGHLFDRLSVLTFYELCIETAGNKAKV
IDLKSKPTSKYRPLPLTTVELQKNCARFLKINAKQSLDAAEKLYQKGFLSYPRTETDIFP
KTMDLKKLVEKQAQLDQTNSSNRSPWADYAKNLLSDNIEGHSQFQTPRAGTHDDKAHPPI
HPIIALGEHATITPVERRVYEYVVRHFLACCSEDGKGTSTTLILDWAGEKFTATGIVVLQ
RNFLDVYPWAKWETTKQLPRLEMNQLADIVTAEMRSGSTSPPKPMTESELIMLMDANGIG
TDATIAEHIEKIQARNYIRPEKVGKESYLQPTTLGIALVHGFEEMGLEDSFAKPFQRREM
EEDLKKICDGIKTRQEVTSNIVTKYRNYYRRTNTSKNKLLEVYDRVKNTII
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagggttctatgtgtggcagaaaagaattctattgcaaaagctgtttcacaaatattg
gggggagggagctctatagcaagagattccggttatatgtatgtcaagaattatgatttt
aatttcagtgggttcccattcgcagattcgagagattgtcaagtcactatgacaagtgtg
gcaggtcatttaactggagttgattttgcaaatgagaggtatggctggggtaaatgtgca
atccatgagttgtttgatgctcctcttagtcaaactttggataagaaccagaaaaagata
gcagataatattaagagggaggcaagaaatgcagatgctttaatgatttggacagattgt
gatagagaaggcgaatatattggttgggaaattctcatagaagcaaaaaagggcaatgga
tctctgaatgaatctaatatatatagagcagtgttttcgcatttagagagaagtcatata
ttacatgcagcaagaaacccaaaacggttggatatgaatagtgttcatgcagtcggtaca
agaatggaaattgatcttagagcaggtgtttcttttacaaggttactaactgaaacaatg
aaacctaagatatgtcctcctgcagttggtccaaatagaaataaaaagaaggaaaatata
gtgatatcgtatggaacatgtcaattcccaacattgggatttgtggttgatagatttgaa
agaataagaaattttattcctgaagagttttggtatatacagttacaaattgcaaatccg
gatccaaatatcacaactacaactcctttccaatgggagaaaggtcatttatttgataga
ttgtctgtgttaacgttttatgagctgtgtatagaaacagcaggaaataaagcaaaagtt
atcgatttaaagtcaaaaccaacttctaaataccgtccattacctttaactactgtagag
ttacagaaaaattgtgctagatttttaaaaattaatgcaaagcaatctctagatgcagct
gaaaagttgtaccagaagggatttttatcttacccaagaactgaaactgatatatttcct
aaaactatggatctcaagaaattggtcgagaaacaagctcaattagatcaaaccaatagt
tcaaatagatcaccttgggcagactacgctaaaaacttattgtctgataacatcgaaggg
cattcacaattccaaacaccacgtgctggtacacatgatgataaagcccatcctccaatc
catcccattattgcattaggtgaacatgccactatcacacctgtcgaacgtagagtatat
gaatatgtcgtcaggcatttccttgcttgttgttccgaagatggtaaaggtacgtcaaca
acacttattttggattgggcaggtgaaaaatttactgcaactggtattgtggtacttcaa
agaaactttctggatgtctatccttgggcaaaatgggaaacaacaaagcaactaccaaga
cttgagatgaatcagctagctgatattgtaactgctgagatgagatccggaagtacctct
ccaccaaaaccaatgacagaaagtgaattgattatgctgatggatgcaaatggaataggt
acggatgccacgattgcagaacacatagaaaagatacaagcaagaaattacatcagacca
gagaaagttgggaaagaaagttatttacagcctacgactttgggcattgcattagttcat
ggatttgaagaaatgggtttagaagactcatttgcaaagccgtttcagagaagagaaatg
gaagaagatttaaaaaaaatatgcgatggtataaagacaaggcaagaagtgacatcaaac
attgttacaaagtaccggaactattacaggagaacaaatacttcaaaaaacaaattatta
gaagtttatgacagagttaaaaacacaataatttaa
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