KEGG   Tetrapisispora phaffii: TPHA_0L01080
Entry
TPHA_0L01080      CDS       T02235                                 
Symbol
TPHA0L01080
Name
(RefSeq) hypothetical protein
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TPHA_0L01080 (TPHA0L01080)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpf03009]
    TPHA_0L01080 (TPHA0L01080)
Ribosome biogenesis [BR:tpf03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TPHA_0L01080 (TPHA0L01080)
SSDB
Motif
Pfam: WD40_Prp19 WD40 Utp13 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_RIG_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR75_2nd WD40_like Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD_LRWD1 Beta-prop_LRRK2 WDR54 Beta-prop_WDR11_2nd Beta-prop_WDR35_2nd
Other DBs
NCBI-GeneID: 11531672
NCBI-ProteinID: XP_003687899
UniProt: G8BZY7
LinkDB
Position
12:226790..229297
AA seq 835 aa
MDLKNSYSHTSLRPIYAGSGAVASISEDGTILATPLLDEINIIKLSADATVEGLDHTKHN
ASQILHKIENDDEQEITALALTPDAQYLCYVSQAQLLKIFKLSTGKIVKSMKISSPSYVL
ETDPTSTLLAIGGTDGSVTVIDIENGYITHSLKGHGATISSLKFYGEQHTNTWLLSSGDT
NGMVKIWDLVSRKAIHTLQEHNSAVRGIDFKLIEKKNSEDSLQLITGARDDVINHWEFKD
VTNLKRCKLLKTIPVHQQIEACGFIINIDGIDDDLIYTSGGDAVLQIVSLNNNSIVKKSK
KPLEELFIIGVLPVRNFTQLYLVFSDQTLQLVDLKDTFSNPKEYIEVVSSLAGNHGTIAD
MKVVGPNFDKLALATNSSTLRIIPISDVDDSNSVSISTELYEGHTDLLNAVDATEDGLWI
ATASKDNSAILWRYNPRTTLFCKYAHFQGHVSSVTSVGLPNVMNKGWPEYLITASNDLTV
KKWKVPKPTDRFDIEIYSISSSEYTRRAHEKDINMLSISPNDSIFATASYDKTCKIWDLE
TGELKATLNNHKRGLWDVSFCQYDKFIATASGDKTVKIWSLDTFTVVKTLEGHSNAVQRC
SFFNKQKQLVSTGADGLVKLWDCSTGECINTLDGHDNRIWALNVIKDGDIVITADADGVF
QFWKDRTEEAREEDIEKEKLKVEQMQTLENYISSGDWTNAFLLAITLDHPARLYNVLKQS
TRGVATNLYDEDGNKIIFNKELDNVISTLNDEQLLMLMQRCRDWNTNGRTHSVAQKTINC
ILTKYNISKLSDISGMMKVIDSILPYSQRHFNRVDNLIEESYILDHALVEMDKLF
NT seq 2508 nt   +upstreamnt  +downstreamnt
atggatttgaaaaatagttattcgcatacctctttgaggccaatatatgcaggcagtggt
gctgtagcctctatatccgaagatggtactatattagctacacctttattagatgaaata
aatatcatcaagttaagcgctgacgcaactgtcgaaggactcgatcacaccaaacataat
gcatcacaaatacttcataagatagaaaatgatgatgaacaagaaataacagctttggca
ttgactccagatgcacaatatctgtgctatgtttcccaggcgcaattattgaaaatattt
aaactttcaacaggaaaaattgtcaagtctatgaaaatttcatcaccttcatatgtatta
gaaactgatccaacctctacattgctcgcaatcggcggtacagatggttccgttactgtt
atcgatatagaaaatgggtatataacacattctttaaagggccatggtgctactatctca
agtttgaaattctatggtgaacaacatactaatacttggctgttatcttcaggtgatacc
aatggtatggttaaaatttgggatttggttagcaggaaagccatccacacattacaagaa
cataattctgctgtcagaggaattgacttcaaacttatcgaaaagaagaacagcgaggat
tcgttgcagttaataaccggtgcaagagatgatgtaattaaccactgggaattcaaagat
gtaacaaatttgaaaagatgtaaattattaaagactataccagtgcaccaacaaattgaa
gcttgtggtttcattataaacattgatggtattgatgacgatctaatatacacttctggt
ggtgatgctgttcttcaaattgtctcattaaataataattcaatagttaaaaaatctaaa
aagccgcttgaagagttattcatcatcggtgttttaccagtcagaaattttactcaacta
tatctagtattttctgaccaaacattgcaattggttgatttgaaagacactttttctaat
ccaaaagaatatatcgaagttgtatcatcgctagctggtaaccacggcacaatcgcagat
atgaaagttgttggtccaaattttgataagttagctttggctacaaactcttccacatta
agaataatacctatctcagacgtcgatgatagtaattcagtctccatctctacagaattg
tacgaaggtcataccgatttattaaacgctgttgacgctaccgaagatggtttatggatt
gccacagcttctaaagacaactctgctattttatggagatacaacccacgcaccacctta
ttttgtaaatatgcacatttccaaggccatgtttcttcagtgacctctgttggtttacct
aatgttatgaataaaggttggcctgaatatttaatcaccgcatctaatgacttgacagtg
aagaaatggaaagttcctaaaccaactgacaggtttgatattgaaatatattctatcagt
tcgtcagaatacacccgtagagctcacgaaaaggatataaatatgctttcaatttcccca
aacgattctatctttgctaccgcatcatatgataaaacttgtaagatttgggatcttgaa
acaggtgaactaaaagccacattgaataatcacaaacgtggtttatgggatgtctctttt
tgtcaatatgataaatttattgctactgcatctggtgataaaactgttaagatttggtcg
ctggacaccttcacagttgtaaagactttagaaggtcactcaaatgctgtccaaaggtgt
tctttctttaacaaacaaaaacaattagtatcaactggtgcagatggtctagttaagctt
tgggactgctcgactggtgaatgcataaatactttagatggtcatgataacaggatatgg
gctttgaatgtgatcaaagatggtgacatagtaattactgctgatgcagatggtgtcttc
caattttggaaggatcgtactgaagaagccagagaagaagacattgaaaaagaaaaatta
aaggttgaacaaatgcaaacattagagaactatatatccagcggagactggacgaacgcc
ttcttgttagcgattacattagatcacccagcaagactttataatgttctaaaacaatca
acaagaggggtagctacaaatctttatgacgaagatggaaacaaaatcattttcaacaaa
gagttggataatgttatttctacattaaacgatgaacaattgttaatgctaatgcaaaga
tgtagagattggaacacaaatggacgtacgcattccgttgcacaaaaaaccatcaactgt
atcttaacaaaatacaatattagtaaactatcagacatatctggaatgatgaaggtgata
gattccattttaccatacagtcaaagacacttcaacagagtagataatttgatagaagaa
agttacattctagatcatgcattagttgagatggataagttattctaa

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