Tetrapisispora phaffii: TPHA_0L01080
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Entry
TPHA_0L01080 CDS
T02235
Symbol
TPHA0L01080
Name
(RefSeq) hypothetical protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TPHA_0L01080 (TPHA0L01080)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0L01080 (TPHA0L01080)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TPHA_0L01080 (TPHA0L01080)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Utp13
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Nup120_160
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR75_2nd
WD40_like
Beta-prop_HPS5
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD_LRWD1
Beta-prop_LRRK2
WDR54
Beta-prop_WDR11_2nd
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
11531672
NCBI-ProteinID:
XP_003687899
UniProt:
G8BZY7
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All DBs
Position
12:226790..229297
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AA seq
835 aa
AA seq
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MDLKNSYSHTSLRPIYAGSGAVASISEDGTILATPLLDEINIIKLSADATVEGLDHTKHN
ASQILHKIENDDEQEITALALTPDAQYLCYVSQAQLLKIFKLSTGKIVKSMKISSPSYVL
ETDPTSTLLAIGGTDGSVTVIDIENGYITHSLKGHGATISSLKFYGEQHTNTWLLSSGDT
NGMVKIWDLVSRKAIHTLQEHNSAVRGIDFKLIEKKNSEDSLQLITGARDDVINHWEFKD
VTNLKRCKLLKTIPVHQQIEACGFIINIDGIDDDLIYTSGGDAVLQIVSLNNNSIVKKSK
KPLEELFIIGVLPVRNFTQLYLVFSDQTLQLVDLKDTFSNPKEYIEVVSSLAGNHGTIAD
MKVVGPNFDKLALATNSSTLRIIPISDVDDSNSVSISTELYEGHTDLLNAVDATEDGLWI
ATASKDNSAILWRYNPRTTLFCKYAHFQGHVSSVTSVGLPNVMNKGWPEYLITASNDLTV
KKWKVPKPTDRFDIEIYSISSSEYTRRAHEKDINMLSISPNDSIFATASYDKTCKIWDLE
TGELKATLNNHKRGLWDVSFCQYDKFIATASGDKTVKIWSLDTFTVVKTLEGHSNAVQRC
SFFNKQKQLVSTGADGLVKLWDCSTGECINTLDGHDNRIWALNVIKDGDIVITADADGVF
QFWKDRTEEAREEDIEKEKLKVEQMQTLENYISSGDWTNAFLLAITLDHPARLYNVLKQS
TRGVATNLYDEDGNKIIFNKELDNVISTLNDEQLLMLMQRCRDWNTNGRTHSVAQKTINC
ILTKYNISKLSDISGMMKVIDSILPYSQRHFNRVDNLIEESYILDHALVEMDKLF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaaaatagttattcgcatacctctttgaggccaatatatgcaggcagtggt
gctgtagcctctatatccgaagatggtactatattagctacacctttattagatgaaata
aatatcatcaagttaagcgctgacgcaactgtcgaaggactcgatcacaccaaacataat
gcatcacaaatacttcataagatagaaaatgatgatgaacaagaaataacagctttggca
ttgactccagatgcacaatatctgtgctatgtttcccaggcgcaattattgaaaatattt
aaactttcaacaggaaaaattgtcaagtctatgaaaatttcatcaccttcatatgtatta
gaaactgatccaacctctacattgctcgcaatcggcggtacagatggttccgttactgtt
atcgatatagaaaatgggtatataacacattctttaaagggccatggtgctactatctca
agtttgaaattctatggtgaacaacatactaatacttggctgttatcttcaggtgatacc
aatggtatggttaaaatttgggatttggttagcaggaaagccatccacacattacaagaa
cataattctgctgtcagaggaattgacttcaaacttatcgaaaagaagaacagcgaggat
tcgttgcagttaataaccggtgcaagagatgatgtaattaaccactgggaattcaaagat
gtaacaaatttgaaaagatgtaaattattaaagactataccagtgcaccaacaaattgaa
gcttgtggtttcattataaacattgatggtattgatgacgatctaatatacacttctggt
ggtgatgctgttcttcaaattgtctcattaaataataattcaatagttaaaaaatctaaa
aagccgcttgaagagttattcatcatcggtgttttaccagtcagaaattttactcaacta
tatctagtattttctgaccaaacattgcaattggttgatttgaaagacactttttctaat
ccaaaagaatatatcgaagttgtatcatcgctagctggtaaccacggcacaatcgcagat
atgaaagttgttggtccaaattttgataagttagctttggctacaaactcttccacatta
agaataatacctatctcagacgtcgatgatagtaattcagtctccatctctacagaattg
tacgaaggtcataccgatttattaaacgctgttgacgctaccgaagatggtttatggatt
gccacagcttctaaagacaactctgctattttatggagatacaacccacgcaccacctta
ttttgtaaatatgcacatttccaaggccatgtttcttcagtgacctctgttggtttacct
aatgttatgaataaaggttggcctgaatatttaatcaccgcatctaatgacttgacagtg
aagaaatggaaagttcctaaaccaactgacaggtttgatattgaaatatattctatcagt
tcgtcagaatacacccgtagagctcacgaaaaggatataaatatgctttcaatttcccca
aacgattctatctttgctaccgcatcatatgataaaacttgtaagatttgggatcttgaa
acaggtgaactaaaagccacattgaataatcacaaacgtggtttatgggatgtctctttt
tgtcaatatgataaatttattgctactgcatctggtgataaaactgttaagatttggtcg
ctggacaccttcacagttgtaaagactttagaaggtcactcaaatgctgtccaaaggtgt
tctttctttaacaaacaaaaacaattagtatcaactggtgcagatggtctagttaagctt
tgggactgctcgactggtgaatgcataaatactttagatggtcatgataacaggatatgg
gctttgaatgtgatcaaagatggtgacatagtaattactgctgatgcagatggtgtcttc
caattttggaaggatcgtactgaagaagccagagaagaagacattgaaaaagaaaaatta
aaggttgaacaaatgcaaacattagagaactatatatccagcggagactggacgaacgcc
ttcttgttagcgattacattagatcacccagcaagactttataatgttctaaaacaatca
acaagaggggtagctacaaatctttatgacgaagatggaaacaaaatcattttcaacaaa
gagttggataatgttatttctacattaaacgatgaacaattgttaatgctaatgcaaaga
tgtagagattggaacacaaatggacgtacgcattccgttgcacaaaaaaccatcaactgt
atcttaacaaaatacaatattagtaaactatcagacatatctggaatgatgaaggtgata
gattccattttaccatacagtcaaagacacttcaacagagtagataatttgatagaagaa
agttacattctagatcatgcattagttgagatggataagttattctaa
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