KEGG   Tetrapisispora phaffii: TPHA_0L01720
Entry
TPHA_0L01720      CDS       T02235                                 
Symbol
TPHA0L01720
Name
(RefSeq) hypothetical protein
  KO
K10752  histone-binding protein RBBP4
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03082  ATP-dependent chromatin remodeling
tpf03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    TPHA_0L01720 (TPHA0L01720)
   03083 Polycomb repressive complex
    TPHA_0L01720 (TPHA0L01720)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tpf03036]
    TPHA_0L01720 (TPHA0L01720)
Chromosome and associated proteins [BR:tpf03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     TPHA_0L01720 (TPHA0L01720)
  Histone modification proteins
   HAT complexes
    HATB complex
     TPHA_0L01720 (TPHA0L01720)
   HDAC complexes
    Sin3A-HDAC complex
     TPHA_0L01720 (TPHA0L01720)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     TPHA_0L01720 (TPHA0L01720)
    PRC2.2
     TPHA_0L01720 (TPHA0L01720)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     TPHA_0L01720 (TPHA0L01720)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    TPHA_0L01720 (TPHA0L01720)
  Chromatin remodeling factors
   NuRD complex
    TPHA_0L01720 (TPHA0L01720)
   NuRF complex
    TPHA_0L01720 (TPHA0L01720)
   NuRF complex (fruit fly)
    TPHA_0L01720 (TPHA0L01720)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 EIF3I eIF2A MIOS_WD40 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR11_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_RFWD3 Lactonase
Other DBs
NCBI-GeneID: 11531768
NCBI-ProteinID: XP_003687959
UniProt: G8C047
LinkDB
Position
12:362572..363831
AA seq 419 aa
MEPEIQDDTTVNNIEATAISQDLQERYTHWKKNTRLLYDYLNTNSTKWPSLSCQFFQDVN
TKNDSHRILLSSFTSGLMPEQESINIMSISTLKHVPWASLNNFDMDEMEFKPDNNLKLPP
KNLHTEQTITFPNGDCNRARYLPQNQDIIAGASSDGTVYIFNRTKYGSTLRQTSSFQSYQ
ARFAEPENTVQSVDSNPNEALSIDWNVQREGLLAASYSDGEIKTWDLKKFSNANTTITTP
TVSIMMDTNGANDVTWMPLHDSLLAACGESNKLIIYDIRGSREHTTISSGIHEDGINACR
FNYANNLIVASADTVGNVHIWDIRKSNEIVKTIPHGSSISTIEWNPNMDTILATAGQDDG
LVKLWDVTDSELIFTHGGHMLGVNDISWNRHDPWLMCSVARDNSVQIWRPAHNLVEEQV
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggaacctgaaattcaagacgatacgacagtgaacaatatcgaagcaacagctatttca
caagacttgcaagaaagatacacgcattggaaaaagaacactagattgttatatgattac
ttaaatactaattctacgaaatggccttctctatcatgtcaatttttccaagatgtaaat
acaaagaatgactcgcataggatacttttatcatcatttacctctggcctaatgcctgaa
caagaatccattaacattatgagcatatcaacattgaagcatgtaccatgggcctccttg
aataattttgatatggatgaaatggaatttaaaccagataataatttaaaattacctcca
aaaaatttacacactgagcaaacaattacattccccaatggtgactgtaatagagccaga
tacttgccccaaaatcaagatataattgcaggtgcatcttcggatggtaccgtctatata
tttaatagaactaagtacggttctacgttaagacaaactagttctttccaatcgtatcaa
gctagatttgcagaacctgagaatactgttcagtcagttgatagtaatccgaatgaagca
ttatctattgactggaatgtacaaagagaagggcttttagcagcttcatattcagatggt
gagattaaaacgtgggacttgaagaaattttcgaacgccaacacaacaatcaccactcct
actgtttcaataatgatggatacaaatggtgccaatgatgtaacatggatgccattgcat
gattccctgctggcagcttgtggtgaaagcaataaattaataatctatgatataagagga
tccagagaacataccacgatatcttcaggaattcatgaagatggtatcaatgcatgtcgc
ttcaattacgcgaacaatttaatagtagcatctgctgatactgtaggtaatgtacatata
tgggatatcagaaagtctaatgagatagtgaagacaataccgcatggttcctctatctct
acgatcgagtggaaccccaacatggataccatattggccaccgctgggcaagacgacgga
ttagtcaagctatgggatgtaactgactcggaactgattttcacacacggtggacacatg
cttggtgtcaacgacatatcttggaacagacatgacccatggttgatgtgcagtgtcgct
agagacaattcggtccagatctggagaccagcgcataatttagtagaagaacaggtgtaa

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