Tetrapisispora phaffii: TPHA_0L01720
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Entry
TPHA_0L01720 CDS
T02235
Symbol
TPHA0L01720
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03082
ATP-dependent chromatin remodeling
tpf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TPHA_0L01720 (TPHA0L01720)
03083 Polycomb repressive complex
TPHA_0L01720 (TPHA0L01720)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0L01720 (TPHA0L01720)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
TPHA_0L01720 (TPHA0L01720)
Histone modification proteins
HAT complexes
HATB complex
TPHA_0L01720 (TPHA0L01720)
HDAC complexes
Sin3A-HDAC complex
TPHA_0L01720 (TPHA0L01720)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
TPHA_0L01720 (TPHA0L01720)
PRC2.2
TPHA_0L01720 (TPHA0L01720)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
TPHA_0L01720 (TPHA0L01720)
Heterochromatin formation proteins
Other heterochromatin formation proteins
TPHA_0L01720 (TPHA0L01720)
Chromatin remodeling factors
NuRD complex
TPHA_0L01720 (TPHA0L01720)
NuRF complex
TPHA_0L01720 (TPHA0L01720)
NuRF complex (fruit fly)
TPHA_0L01720 (TPHA0L01720)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
eIF2A
MIOS_WD40
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD40_RFWD3
Lactonase
Motif
Other DBs
NCBI-GeneID:
11531768
NCBI-ProteinID:
XP_003687959
UniProt:
G8C047
LinkDB
All DBs
Position
12:362572..363831
Genome browser
AA seq
419 aa
AA seq
DB search
MEPEIQDDTTVNNIEATAISQDLQERYTHWKKNTRLLYDYLNTNSTKWPSLSCQFFQDVN
TKNDSHRILLSSFTSGLMPEQESINIMSISTLKHVPWASLNNFDMDEMEFKPDNNLKLPP
KNLHTEQTITFPNGDCNRARYLPQNQDIIAGASSDGTVYIFNRTKYGSTLRQTSSFQSYQ
ARFAEPENTVQSVDSNPNEALSIDWNVQREGLLAASYSDGEIKTWDLKKFSNANTTITTP
TVSIMMDTNGANDVTWMPLHDSLLAACGESNKLIIYDIRGSREHTTISSGIHEDGINACR
FNYANNLIVASADTVGNVHIWDIRKSNEIVKTIPHGSSISTIEWNPNMDTILATAGQDDG
LVKLWDVTDSELIFTHGGHMLGVNDISWNRHDPWLMCSVARDNSVQIWRPAHNLVEEQV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgaaattcaagacgatacgacagtgaacaatatcgaagcaacagctatttca
caagacttgcaagaaagatacacgcattggaaaaagaacactagattgttatatgattac
ttaaatactaattctacgaaatggccttctctatcatgtcaatttttccaagatgtaaat
acaaagaatgactcgcataggatacttttatcatcatttacctctggcctaatgcctgaa
caagaatccattaacattatgagcatatcaacattgaagcatgtaccatgggcctccttg
aataattttgatatggatgaaatggaatttaaaccagataataatttaaaattacctcca
aaaaatttacacactgagcaaacaattacattccccaatggtgactgtaatagagccaga
tacttgccccaaaatcaagatataattgcaggtgcatcttcggatggtaccgtctatata
tttaatagaactaagtacggttctacgttaagacaaactagttctttccaatcgtatcaa
gctagatttgcagaacctgagaatactgttcagtcagttgatagtaatccgaatgaagca
ttatctattgactggaatgtacaaagagaagggcttttagcagcttcatattcagatggt
gagattaaaacgtgggacttgaagaaattttcgaacgccaacacaacaatcaccactcct
actgtttcaataatgatggatacaaatggtgccaatgatgtaacatggatgccattgcat
gattccctgctggcagcttgtggtgaaagcaataaattaataatctatgatataagagga
tccagagaacataccacgatatcttcaggaattcatgaagatggtatcaatgcatgtcgc
ttcaattacgcgaacaatttaatagtagcatctgctgatactgtaggtaatgtacatata
tgggatatcagaaagtctaatgagatagtgaagacaataccgcatggttcctctatctct
acgatcgagtggaaccccaacatggataccatattggccaccgctgggcaagacgacgga
ttagtcaagctatgggatgtaactgactcggaactgattttcacacacggtggacacatg
cttggtgtcaacgacatatcttggaacagacatgacccatggttgatgtgcagtgtcgct
agagacaattcggtccagatctggagaccagcgcataatttagtagaagaacaggtgtaa
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