Tetrapisispora phaffii: TPHA_0L02250
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Entry
TPHA_0L02250 CDS
T02235
Symbol
TPHA0L02250
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TPHA_0L02250 (TPHA0L02250)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0L02250 (TPHA0L02250)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Pre-60S particles
RNases
TPHA_0L02250 (TPHA0L02250)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_10
ATG11
Motif
Other DBs
NCBI-GeneID:
11531595
NCBI-ProteinID:
XP_003688010
UniProt:
G8C098
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Position
12:complement(470069..471898)
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AA seq
609 aa
AA seq
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MTASVNLTSMDETEVVTETCLAESVISGGAVALESESQLLKKRRRSSASKTQEGSIKESA
ETLGETVKKKKKKQNKNVTFKISEKALEKRISIKDLRDLTLFLMNSTNNAPKWIDIENRS
SIQKVVVLFVPGLEPADYNLPKDSSFHESNHILKQSKLNIIKDISENDSENVLNFPVSAP
GSRTSLFSAYNSFVNVGLTKKEKEDKKKELDKKQITINDLVLDVNDLLRCDYPIHLETEG
IDDQLKEDLISLYKENDPTEEWVNTVDREEEESHIYALDCEMCMSENGLVLTRISIVNFD
GKVVYDKLVKPDVPIIDYLTKYSGITEEKLEGISTTLKDVQHDILKLISKRDILIGHSLQ
SDFNVLKLRHTKVVDTAVCFDHKAGPPFRPSLKFLTSEFIGRDIQNDNDNGHDSIEDAIA
CLELVKLKIVNGLIFGIAVNTENLFLRLSKIGIRSLCLNDSTSNKGFQLVNNLAQTVGCN
DDTEILNKIQETINDYQLFVGRLRNLEFSRNFAQPSIGKNVAVLTAEQSLKLVQDGVQKV
YDNAPGGTAIFLLSGSGDTREWSSLMKELNSLNKEDKQIERQKKDEEIQRAVFKARDGVA
SMVYKQHST
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatccgttaatttaacgtcaatggacgaaaccgaggttgtcacagagacttgt
ctcgcagaaagtgttatttctggaggtgcagtagctttagagtcagaaagtcaactgctg
aagaaaagaagaagatccagcgcatctaaaacccaggaaggttcaattaaagaatcggca
gagacactaggagagacagtgaagaagaagaagaagaagcagaataaaaatgtgacgttt
aagatttctgagaaagcattagaaaaacgaatctcaattaaagatttaagggacttgacg
ttattcctgatgaactctacaaacaatgctccaaaatggattgacattgaaaataggtct
tctatacagaaagtcgtggtcctttttgttccaggtttagaaccggcagattacaaccta
ccaaaagacagttcctttcacgagagtaaccacattcttaaacaatcaaagttgaatatt
attaaagacatatctgagaatgatagtgaaaacgttttaaacttcccagtgagtgccccg
gggtcaagaacttcattgttttctgcttacaattcatttgtaaatgtaggactgacgaaa
aaggaaaaagaagataagaagaaagaactagataagaaacaaattacaatcaatgacctt
gtattagatgtcaacgatctattaagatgcgactacccaatccacttggaaacagaagga
atagatgatcaattaaaggaggatttaataagtctttacaaagaaaatgaccctactgaa
gaatgggtcaatactgttgatagagaagaagaagaatcccatatatatgcattggattgc
gagatgtgtatgtcagagaatggattggtcctaacacgaatcagtattgtgaattttgat
ggaaaggttgtttatgataagttagtcaaaccagatgtcccaatcattgattatttgact
aaatacagtggcattacagaagaaaaattggaaggcatttctacaactctaaaagatgtg
caacatgatattcttaaattaatcagtaaacgtgatatattgattggtcattcattacaa
agtgatttcaacgtgttaaaattaaggcacacaaaggttgtagatacagcagtttgtttt
gatcataaagccggtcctccatttagaccgtcgctgaagtttttaacatctgaattcatt
ggtagggatatacaaaatgataatgataatggacacgattcgatagaagatgccatcgct
tgtttagaattagtcaagctaaaaattgttaacggattaatatttggtattgcagtgaac
actgagaatttatttttaagattatcaaaaattggtatacgatctttatgtctaaatgac
tcaacatctaataaaggatttcaacttgtgaataatttagcacagacagtgggatgcaat
gatgatacagagatcttaaataaaatacaagaaactattaatgactatcaactgttcgta
ggtagattaagaaacttagaattctctcgtaactttgcccaaccttcaatagggaaaaat
gttgcagttctaactgcagaacaatctttaaaacttgttcaggatggtgtacaaaaagta
tacgacaacgctcctgggggtaccgctatattccttttatctggtagcggtgatactaga
gaatggagtagtttaatgaaggaactaaattccctaaacaaagaagacaaacaaatcgaa
agacaaaaaaaagatgaagaaatacaacgtgcggtctttaaagcaagagatggtgtagca
tcaatggtatataaacaacactctacataa
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