Tetrapisispora phaffii: TPHA_0M00190
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Entry
TPHA_0M00190 CDS
T02235
Symbol
TPHA0M00190
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03082
ATP-dependent chromatin remodeling
tpf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TPHA_0M00190 (TPHA0M00190)
03083 Polycomb repressive complex
TPHA_0M00190 (TPHA0M00190)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0M00190 (TPHA0M00190)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
TPHA_0M00190 (TPHA0M00190)
Histone modification proteins
HAT complexes
HATB complex
TPHA_0M00190 (TPHA0M00190)
HDAC complexes
Sin3A-HDAC complex
TPHA_0M00190 (TPHA0M00190)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
TPHA_0M00190 (TPHA0M00190)
PRC2.2
TPHA_0M00190 (TPHA0M00190)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
TPHA_0M00190 (TPHA0M00190)
Heterochromatin formation proteins
Other heterochromatin formation proteins
TPHA_0M00190 (TPHA0M00190)
Chromatin remodeling factors
NuRD complex
TPHA_0M00190 (TPHA0M00190)
NuRF complex
TPHA_0M00190 (TPHA0M00190)
NuRF complex (fruit fly)
TPHA_0M00190 (TPHA0M00190)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
NBCH_WD40
WD40_RFWD3
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_DCAF4
CNH
Motif
Other DBs
NCBI-GeneID:
11532016
NCBI-ProteinID:
XP_003688031
UniProt:
G8C0T6
LinkDB
All DBs
Position
13:complement(38571..39746)
Genome browser
AA seq
391 aa
AA seq
DB search
MEKVEQQEEPLTVDQEYDLWKSNVPLLYDFVSETRLTWPSLTLQWLPGDKTSTRQHLILG
TLTSGAETDYLKIAALDLPDEIIIGKKSDKVVKSNLKVVKKFAHDGEINRARYMPQNTNI
IATVNGEGTIFIYDCSRDKQSALLSTLKYHKDNAYGLAFNPNAEGELISGSDDSTIALWD
ATNDKLKQPIQEWTTSHSDIVNDCQWHCFNTNMFGSVSEDSTLQLFDKRNGGKSDVKISS
KGQYNSIAFSGFSENLFAAAGTTNNIYLYDIRNTGKILHSMTGHEEPVTSLEFSNDKDGI
LISGSSDRRVIMWDLFEIGAEQQPDEADDGLPEVMMIHAGSRSAINDISTHPSIPWLNAS
VEENNIVQVWKCSSKLPRISGTPEVSISDLE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggttgaacaacaagaagaaccacttacggtggaccaagaatacgatttatgg
aaaagtaacgtacctttattatatgattttgtcagcgagacaagacttacttggccatca
ttgactttacaatggttaccaggtgataagacatctaccagacagcatctgattttaggt
acactcacttctggtgcagagacagattatttgaagattgctgctcttgatttgccagat
gaaataataataggcaaaaagtctgataaagttgtgaaatctaatcttaaagtcgtcaag
aaatttgcacatgatggtgaaataaatagggctagatacatgcctcagaacacaaacata
attgcgactgtaaatggtgaaggtactatttttatttatgattgttctagagacaaacaa
tctgctttactctctacattgaaatatcataaggataatgcttatggtcttgcattcaac
cctaatgcagagggtgaactaattagtggctctgacgatagcacaatagctttatgggac
gcaaccaatgataaacttaagcaaccaatccaagaatggactacatcacattcagatata
gtaaacgattgtcaatggcattgctttaacactaatatgtttggttcagtatctgaagat
tctacattacaattatttgacaagaggaatggtgggaaatcagatgttaaaatctcatct
aaaggccaatataactcaattgcattcagtgggttttctgaaaatttatttgcagcagct
ggtactactaataatatatacttatatgatattagaaatacaggtaaaattttacattct
atgaccggccatgaagaacctgtaacaagtttggaattttcaaacgataaagatggtatt
ctgatatccggtagttcagatagacgtgttattatgtgggatttatttgaaattggtgca
gagcagcaaccagatgaggcggatgatggtttaccggaggttatgatgattcatgcaggc
tccagaagtgctattaatgatatttcaacacatccttctatcccatggctgaatgcatct
gttgaagagaacaatatcgttcaggtctggaaatgctctagtaagcttcctaggattagt
ggaactccggaggtttctatctctgatttagaataa
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integrated database retrieval system
