Tetrapisispora phaffii: TPHA_0M00360
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Entry
TPHA_0M00360 CDS
T02235
Symbol
TPHA0M00360
Name
(RefSeq) hypothetical protein
KO
K14655
tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:
5.4.99.28
]
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf00740
Riboflavin metabolism
tpf01100
Metabolic pathways
tpf01240
Biosynthesis of cofactors
Module
tpf_M00911
Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
TPHA_0M00360 (TPHA0M00360)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tpf03016
]
TPHA_0M00360 (TPHA0M00360)
Enzymes [BR:
tpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
TPHA_0M00360 (TPHA0M00360)
Transfer RNA biogenesis [BR:
tpf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TPHA_0M00360 (TPHA0M00360)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
dCMP_cyt_deam_1
MafB19-deam
Motif
Other DBs
NCBI-GeneID:
11531961
NCBI-ProteinID:
XP_003688045
UniProt:
G8C0V0
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All DBs
Position
13:70094..71974
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AA seq
626 aa
AA seq
DB search
MLTRFQRQLVTIKHYNLMTIKREMSSSNNEIDEGNSNTDSQSTSELSEFETYLLHDKARA
RQEKLFKQINQNKRAKRDNSKITQTELRDKAGFKLKVANTNSNRNKQEDPEFEVRIEGPL
RKITPYLFTYKTFCKLRWRDRKLIDVFVNEFRDREESYYIKTIAAGKVFLNNEPANLDSV
IRNGDYITHQIHRHEPPITSRPIKTVFENDDILAIDKPSGIAVHPTGRFRFNTITKILRK
KLGYSVHPCNRLDRLTSGLMFLAKTPKGADEMGDQLKAREVTKEYIARVVGEFPIEETVV
ELPLRSIDPRVSLNAVCKGNDENAKHAKTIFSRISYDGKTSVVKCKPLTGRTHQIRVHLQ
YLGHPIANDPIYSNPSIWGPLLGKGGVEDYKEIADKLDEIGKTKVAESWFFSDAEGEKLL
PDQKCEVCETTLYSDPGPNDLDLWLHAYRYESTELNEYGEKKWSYRTDFPDWAVEPNVKY
MKMALEEARKCGPTRTAFNVGAVLVNGTTILSTGYSRELPGNTHAEQCALEKYFEKNNTK
VVPEGTSIFTTVEPCSLRLSGNEACLERIINQNGNIRTVFVGTMEPNIFVKNNKSLTNLT
KNNIEYVKIPGFEEDCLQVATIGHEN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgagatttcaacgacaacttgtgaccatcaaacattataatttaatgaccatc
aaaagagagatgtccagtagtaataacgaaattgatgagggcaacagtaatactgactcc
caaagcacgtctgagttatctgaatttgagacatatctattacatgataaagcaagagct
agacaagaaaaattattcaaacaaattaatcagaataaaagagctaaaagagacaattct
aaaataacccaaacagaattgcgtgataaggctggatttaagttaaaagtggctaataca
aattccaataggaataaacaagaggatccagagtttgaggttagaattgaaggaccgttg
aggaaaattaccccatacttatttacgtataaaacattttgtaaattgagatggagagat
cgtaaattaattgatgtgtttgttaacgaatttagagatagagaagaaagttactacatc
aaaacaattgctgcaggtaaagtatttttaaacaatgaaccagcaaatttagatagtgtt
attcgaaatggtgattatatcacacatcagatccatcgtcatgaaccaccaataaccagt
aggccaataaaaaccgtatttgagaatgatgatattttggctattgataaaccaagtgga
attgctgttcaccctacaggtagatttagatttaatactataacaaaaatcttaagaaaa
aaattaggatattcagttcatccatgtaatagattagatagattaacaagtggcttaatg
tttttagcaaagactccgaagggagctgatgaaatgggagatcaactaaaggctagagaa
gttacaaaagagtatattgctcgtgttgttggggaatttccaattgaagaaactgttgta
gagctaccgctaagatcaatcgatccaagagtatcattaaatgctgtttgtaaaggtaat
gacgaaaatgcaaaacatgctaaaactatttttagtagaattagttatgacggaaaaact
agtgtcgtaaaatgtaagccattaactggtagaactcatcagataagagttcacttgcaa
tatcttggccatccaattgcaaatgaccctatatattctaatccatcaatttggggccca
ttattaggaaaaggaggtgtggaggattataaagaaatagcagacaaattagatgaaatt
ggtaaaactaaagtggctgagagttggtttttctctgatgcagaaggtgaaaaattactt
ccagatcaaaaatgcgaagtttgtgaaaccaccctttacagtgatcccggtccaaatgat
ttagacttatggttacatgcatacagatatgaatccactgagttaaatgaatatggtgaa
aagaaatggagctaccgtactgatttccctgactgggcagttgaaccaaatgttaagtat
atgaaaatggcattagaagaagccagaaaatgtggaccaacaaggacagcattcaatgta
ggtgcagtacttgtaaacggtactacaatattgtcaactggttattcaagagaattacca
ggaaacacacatgctgaacaatgtgctcttgaaaaatattttgaaaagaataataccaag
gtcgtgccggaaggaacttccattttcactacagtggaaccatgctccttacgattaagt
ggcaatgaagcatgtttagaaaggataattaatcaaaacggtaacattagaacagttttt
gtaggaactatggaaccaaacatatttgttaaaaacaataaaagtttaactaacctaact
aaaaataatattgaatatgtcaaaattccaggattcgaagaggactgcttacaagtggca
acaattggccatgaaaattga
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