KEGG   Tetrapisispora phaffii: TPHA_0M00690
Entry
TPHA_0M00690      CDS       T02235                                 
Symbol
TPHA0M00690
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03020  RNA polymerase
tpf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TPHA_0M00690 (TPHA0M00690)
  09124 Replication and repair
   03420 Nucleotide excision repair
    TPHA_0M00690 (TPHA0M00690)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpf03021]
    TPHA_0M00690 (TPHA0M00690)
   03400 DNA repair and recombination proteins [BR:tpf03400]
    TPHA_0M00690 (TPHA0M00690)
Transcription machinery [BR:tpf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TPHA_0M00690 (TPHA0M00690)
  RNA polymerase III system
   RNA polymerase III
     TPHA_0M00690 (TPHA0M00690)
  RNA polymerase I system
   RNA polymerase I
     TPHA_0M00690 (TPHA0M00690)
DNA repair and recombination proteins [BR:tpf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TPHA_0M00690 (TPHA0M00690)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Mrr_cat SH3_2
Other DBs
NCBI-GeneID: 11532030
NCBI-ProteinID: XP_003688078
UniProt: G8C0C9
LinkDB
Position
13:complement(130921..131568)
AA seq 215 aa
MDKDSERSVSSLWRTFRTVKEMVRDRGYFISQDEIELPLEDFRAKYCDYMGKPQRKMMSF
QANPTEESLEKFPETGSLWVEFCDEPSVGVKTMKNFVIHIQEKNYQTGIFVYQTNVTPSA
MKLVPSIPPATIETFHEASLVVNITHHELVPKHIRLSEEEKKDLLKRYRLKESQLPRIQR
ADPVALYLGLKRGEVVKIIRKSETSGRYASYRICM
NT seq 648 nt   +upstreamnt  +downstreamnt
atggataaggatagtgaaagaagtgtctcttctctgtggagaactttcagaaccgttaag
gaaatggtcagagacagaggttatttcatttctcaagatgaaattgaactgcctttggag
gatttcagagctaaatattgtgattatatgggtaagccacaacgtaaaatgatgtctttc
caagctaatccaactgaagaatctctggaaaaatttccggagactggctctttatgggtt
gagttctgtgatgagccatctgtcggtgtcaagactatgaagaattttgttatacatatt
caagaaaaaaattatcagacgggtatatttgtttaccaaactaacgttacaccaagtgcg
atgaaattggttccctccatcccacctgctactattgaaactttccacgaagcttcttta
gttgtcaacattacacatcacgaattagttccaaagcatataagattgagtgaagaagaa
aagaaggatctattaaaaagatacagattaaaagaatctcaactgccaagaatccaaaga
gctgatccagttgcattatatctggggttgaagagaggtgaagtcgtgaagatcatcaga
aagagtgaaacttccggtcgttacgcaagttacagaatatgtatgtga

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