Tetrapisispora phaffii: TPHA_0M00990
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Entry
TPHA_0M00990 CDS
T02235
Symbol
TPHA0M00990
Name
(RefSeq) hypothetical protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03420
Nucleotide excision repair
tpf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
TPHA_0M00990 (TPHA0M00990)
09124 Replication and repair
03420 Nucleotide excision repair
TPHA_0M00990 (TPHA0M00990)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpf04121
]
TPHA_0M00990 (TPHA0M00990)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0M00990 (TPHA0M00990)
Ubiquitin system [BR:
tpf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TPHA_0M00990 (TPHA0M00990)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
TPHA_0M00990 (TPHA0M00990)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_WDR75_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
11532024
NCBI-ProteinID:
XP_003688107
UniProt:
G8C0F8
LinkDB
All DBs
Position
13:complement(193577..194938)
Genome browser
AA seq
453 aa
AA seq
DB search
MNYSILQYKYNPNVSALNTVNKIKRNDFERLLDNEAPRVYNNISSQSSNLSNVSLNNVSC
LDIDNTGKFLLAGMNDGLISAWAFNDKPGEQGELIDRKLKQIKRDTASDDEEDETHSTAT
AAQQRGVAHPVREVHSFNVNRNRYRMYRKSNSPMNLDVDSEVKSEKSHRYRIHTIKWYAK
DNGLFFTGSNDCKFKMWDTASGFEPIQSVALYDSKNDRKVKINQIDCNHGSGSDVVALAT
EDHSPRIVDLRNMNYGITFSSRDRKNEEKSEILCCKFNPSVQRQWYFATGEDNGSVNIWD
SRQVSRPWREVTSADTDSRRAHTRSCNDLIWNSEGTELVTLGTDGKIKKWQPFGSSATLP
APQLIGSVDSNRNRHKKRTSVRLQWHTDTYLLVNTDHNEVHVYETHTGKLYSKLKNPLPS
RRQIDATALQANIANGIGTRIILGTSNSIVEYI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaattattcaatcttgcagtacaaatataatcctaatgtcagtgcactaaacacggta
aacaaaatcaagagaaatgactttgaaaggctgctagataatgaagctccaagagtttat
aacaatatcagttcacaatccagtaatttaagcaatgttagtttgaacaatgttagctgc
ttggatattgataacactggtaaatttcttctagcgggtatgaatgacggtttaattagt
gcttgggccttcaatgacaaacctggtgaacagggcgagcttatagataggaagctcaaa
cagataaagagggatactgccagcgatgacgaagaggatgaaacccacagtacagcgaca
gcagcacagcaacgtggagtggcgcatcctgttcgcgaggtacatagtttcaatgtcaac
aggaacaggtatcgaatgtatcgaaaatcgaattctcctatgaacttggatgtcgacagc
gaggtgaagagtgagaaaagtcaccgctatcgaatccacaccataaagtggtacgccaaa
gacaatgggctgttcttcacgggttccaacgattgcaaattcaagatgtgggacactgcg
agtgggttcgagcccattcagagcgtcgctttgtatgatagtaagaacgaccggaaagtg
aagatcaaccaaatcgactgtaaccatggctctgggtcagatgtagttgcacttgccacg
gaggatcactcgccgcgaatagtggacctacgcaacatgaactatggcatcacgttttcg
tcccgggaccgcaagaacgaggagaagagcgagatactgtgttgcaaattcaaccccagc
gtccaaagacagtggtacttcgccacgggtgaagacaatgggtcagtcaacatctgggac
tcgcgacaagtgagccgtccctggcgagaggtaacgagcgccgacaccgatagcagacgc
gcacacacccgcagctgcaacgatctgatctggaactctgaaggcaccgagctggtcaca
ctggggaccgacggtaagatcaaaaagtggcagccgttcggctcgagcgccacgttgcca
gcaccgcagctgatcggaagcgtcgacagcaacaggaaccgccacaagaagagaaccagt
gtacggttgcagtggcacaccgacacctatttactcgtgaacaccgaccacaacgaagtc
cacgtatacgaaacacacaccggcaagctatactccaaattgaagaatccgttgcccagt
cgcagacagatagacgcgacagcgttgcaagccaacatcgccaacggtataggcacccgt
atcatcctaggcacctccaacagcatagtcgagtacatctaa
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