KEGG   Tetrapisispora phaffii: TPHA_0M00990
Entry
TPHA_0M00990      CDS       T02235                                 
Symbol
TPHA0M00990
Name
(RefSeq) hypothetical protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03420  Nucleotide excision repair
tpf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    TPHA_0M00990 (TPHA0M00990)
  09124 Replication and repair
   03420 Nucleotide excision repair
    TPHA_0M00990 (TPHA0M00990)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tpf04121]
    TPHA_0M00990 (TPHA0M00990)
   03400 DNA repair and recombination proteins [BR:tpf03400]
    TPHA_0M00990 (TPHA0M00990)
Ubiquitin system [BR:tpf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     TPHA_0M00990 (TPHA0M00990)
DNA repair and recombination proteins [BR:tpf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      TPHA_0M00990 (TPHA0M00990)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_RIG_2nd WDR55 Beta-prop_EML Beta-prop_EML_2 Beta-prop_NUP159_NUP214 Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_WDR75_1st WD40_RFWD3
Other DBs
NCBI-GeneID: 11532024
NCBI-ProteinID: XP_003688107
UniProt: G8C0F8
LinkDB
Position
13:complement(193577..194938)
AA seq 453 aa
MNYSILQYKYNPNVSALNTVNKIKRNDFERLLDNEAPRVYNNISSQSSNLSNVSLNNVSC
LDIDNTGKFLLAGMNDGLISAWAFNDKPGEQGELIDRKLKQIKRDTASDDEEDETHSTAT
AAQQRGVAHPVREVHSFNVNRNRYRMYRKSNSPMNLDVDSEVKSEKSHRYRIHTIKWYAK
DNGLFFTGSNDCKFKMWDTASGFEPIQSVALYDSKNDRKVKINQIDCNHGSGSDVVALAT
EDHSPRIVDLRNMNYGITFSSRDRKNEEKSEILCCKFNPSVQRQWYFATGEDNGSVNIWD
SRQVSRPWREVTSADTDSRRAHTRSCNDLIWNSEGTELVTLGTDGKIKKWQPFGSSATLP
APQLIGSVDSNRNRHKKRTSVRLQWHTDTYLLVNTDHNEVHVYETHTGKLYSKLKNPLPS
RRQIDATALQANIANGIGTRIILGTSNSIVEYI
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgaattattcaatcttgcagtacaaatataatcctaatgtcagtgcactaaacacggta
aacaaaatcaagagaaatgactttgaaaggctgctagataatgaagctccaagagtttat
aacaatatcagttcacaatccagtaatttaagcaatgttagtttgaacaatgttagctgc
ttggatattgataacactggtaaatttcttctagcgggtatgaatgacggtttaattagt
gcttgggccttcaatgacaaacctggtgaacagggcgagcttatagataggaagctcaaa
cagataaagagggatactgccagcgatgacgaagaggatgaaacccacagtacagcgaca
gcagcacagcaacgtggagtggcgcatcctgttcgcgaggtacatagtttcaatgtcaac
aggaacaggtatcgaatgtatcgaaaatcgaattctcctatgaacttggatgtcgacagc
gaggtgaagagtgagaaaagtcaccgctatcgaatccacaccataaagtggtacgccaaa
gacaatgggctgttcttcacgggttccaacgattgcaaattcaagatgtgggacactgcg
agtgggttcgagcccattcagagcgtcgctttgtatgatagtaagaacgaccggaaagtg
aagatcaaccaaatcgactgtaaccatggctctgggtcagatgtagttgcacttgccacg
gaggatcactcgccgcgaatagtggacctacgcaacatgaactatggcatcacgttttcg
tcccgggaccgcaagaacgaggagaagagcgagatactgtgttgcaaattcaaccccagc
gtccaaagacagtggtacttcgccacgggtgaagacaatgggtcagtcaacatctgggac
tcgcgacaagtgagccgtccctggcgagaggtaacgagcgccgacaccgatagcagacgc
gcacacacccgcagctgcaacgatctgatctggaactctgaaggcaccgagctggtcaca
ctggggaccgacggtaagatcaaaaagtggcagccgttcggctcgagcgccacgttgcca
gcaccgcagctgatcggaagcgtcgacagcaacaggaaccgccacaagaagagaaccagt
gtacggttgcagtggcacaccgacacctatttactcgtgaacaccgaccacaacgaagtc
cacgtatacgaaacacacaccggcaagctatactccaaattgaagaatccgttgcccagt
cgcagacagatagacgcgacagcgttgcaagccaacatcgccaacggtataggcacccgt
atcatcctaggcacctccaacagcatagtcgagtacatctaa

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