Tetrapisispora phaffii: TPHA_0M01430
Help
Entry
TPHA_0M01430 CDS
T02235
Symbol
TPHA0M01430
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03030
DNA replication
tpf03410
Base excision repair
tpf03420
Nucleotide excision repair
tpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPHA_0M01430 (TPHA0M01430)
03410 Base excision repair
TPHA_0M01430 (TPHA0M01430)
03420 Nucleotide excision repair
TPHA_0M01430 (TPHA0M01430)
03430 Mismatch repair
TPHA_0M01430 (TPHA0M01430)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0M01430 (TPHA0M01430)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0M01430 (TPHA0M01430)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0M01430 (TPHA0M01430)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TPHA_0M01430 (TPHA0M01430)
DNA Replication Termination Factors
ELG1-RFC complex
TPHA_0M01430 (TPHA0M01430)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TPHA_0M01430 (TPHA0M01430)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TPHA_0M01430 (TPHA0M01430)
Check point factors
HRAD17(Rad24)-RFC complex
TPHA_0M01430 (TPHA0M01430)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
FPN1
AAA_16
Pyr_redox
Motif
Other DBs
NCBI-GeneID:
11531982
NCBI-ProteinID:
XP_003688152
UniProt:
G8C0K3
LinkDB
All DBs
Position
13:307265..308335
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPKTISKLSHNDSLTEFLTSLTVQARDLPHLLLYGPNGSGKKTRCMALLEAI
FGPGVYRLKIDVRQFVTPSNKKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQME
QVDFQDSKDGLAHRYKCVIINEADSLTRDAQAALRRTMEKYSKNIRLIMICDSMSSIISP
IKSRCLMIRSSAPTDEEIVNILKDIAEKEGVTVASDDILKKVAIEADGNLRVAILMLESM
ALTNELSLKSNTVIIKPDWLVVILKLANKIQRERSVACLVECRAVLYDLLAHCIPARVIL
ENLTFALLKQSGNSSSVKADIINIASIFDERLSLGNKVIFHLEGFIAKVMVALDKS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatgggttgacaaataccgtccaaagacgatctcaaaattatcacataatgat
tcattaactgaatttttaacttcattgactgttcaagctcgtgatttaccacatttacta
ttatatggtccaaatggtagtggtaaaaagactagatgcatggccttgctggaggcaatc
tttggtccaggtgtctatagattaaaaatcgatgttagacaatttgttacaccatcaaat
aaaaaattagaattaaacgtggttagctcaccatatcatttggaaattacaccaagtgac
atgggtaataatgataggattgttatccaagaattattaaaagaagtagctcaaatggaa
caggtggatttccaagattcaaaagatggtttagctcatagatacaaatgtgtaatcatc
aatgaagctgattcattgacaagagatgcacaagccgctttaagacgtacaatggaaaaa
tattccaaaaatattagattgattatgatttgtgattctatgtcttccattatatctcca
ataaagtcccgttgtttaatgattcgttcttcagctccaactgatgaggaaattgttaat
atactaaaagatatcgccgaaaaggaaggtgtcacagttgcatctgatgacatattaaag
aaagttgcaattgaggcagatggtaatttaagagttgccattttaatgttagagtccatg
gcattaacaaatgaactatcattaaaatcaaacactgtaataataaagccagattggtta
gttgttatattaaaactagccaacaaaattcaacgagaaagatcggtagcgtgccttgtc
gagtgccgtgctgtattatatgatttattagcacattgtattcccgcaagggtcatttta
gaaaatcttacatttgcattattgaaacaatcaggaaactcatcttctgttaaggcagac
atcataaatattgcaagtatatttgatgaaagattatcattaggtaataaagtcatcttc
catttggaaggtttcatcgccaaagtcatggttgcattagataaatcataa
DBGET
integrated database retrieval system
