KEGG   Tetrapisispora phaffii: TPHA_0M01830
Entry
TPHA_0M01830      CDS       T02235                                 
Symbol
TPHA0M01830
Name
(RefSeq) hypothetical protein
  KO
K14855  ribosome assembly protein 4
Organism
tpf  Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpf03009]
    TPHA_0M01830 (TPHA0M01830)
Ribosome biogenesis [BR:tpf03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    TPHA_0M01830 (TPHA0M01830)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I WDR55 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EML Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_WDR41 Beta-prop_WDR19_1st NLE Beta-prop_IFT140_1st Beta-prop_DCAF4 eIF2A Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_Nup120_160 Ge1_WD40 Tricorn_2nd Beta-prop_ACSF4 WD40_RFWD3 RMC1_N Beta-prop_HPS5 Beta-prop_WDR75_2nd Tricorn_N Cytochrom_D1 Beta-prop_NWD2_C PEP5_VPS11_N
Other DBs
NCBI-GeneID: 11531956
NCBI-ProteinID: XP_003688192
UniProt: G8C0P3
LinkDB
Position
13:complement(378923..380470)
AA seq 515 aa
MATVIPPPSKKQRKAAQQEREVDIIPTSLPNVLVKFQASDTNETLGGSIRVPGAITEKQL
EELLNQLNGTSDDPVPYVFSCNVKGKNKIDPEQIIDIVDNLYSTLLKPGHNTTEDIITLI
YTPRAIFKVRPITRSSAAIAGHGSTILCSSFAPHTSSRMVTGAGDNTARIWDCDTQTPMV
TLSGHTNWVLCVAWSPDGELIATGSMDNTIRLWEGKNGKPFGEAMRGHQKWITSLSWEPL
HLVKAGERPKLATSSKDGTIKVWDTGRRVCLYTLSGHVNSVSCVKWGGKNLLYSGSHDKT
VRVWDMNLGGKCINILKSHAHWVNHLSLSTDYALRVGPFDHTGIMPATPEEARAKALKNY
EKVAKRNGSDEELMVTASDDFTMFLWNPSKSTKPISRMTGHQKLVNHVAFSPDGRYIVSA
SFDNSIKLWDSRDGKFITTFRGHVASVYQVAWSSDCRLLASCSKDTSLKVWDIRTKKLSV
DLPGHLDEVYTVDWSVDGKRVCSGGKDKMVRLWTH
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggcaactgtaatcccaccaccttctaaaaaacaaagaaaggctgctcaacaagaaaga
gaggtcgatatcatccctacttctctaccaaatgtcttagtgaagttccaagcttcagac
acaaatgaaactttgggtggttctataagagttccaggtgcaatcactgaaaagcagtta
gaagaactattgaatcaattaaacggcacatccgatgatccagttccttatgtcttcagt
tgcaatgttaagggtaaaaataaaattgatcctgaacaaattatagatattgttgataat
ctatattcaacccttctgaaacccggtcacaataccactgaagatattatcactttgata
tacacaccaagagctatcttcaaagtcagaccaatcacacgtagttccgctgctattgct
ggtcatggatcaactattctatgttcctcttttgctccacacaccagctctagaatggtg
acaggtgctggtgacaatactgcacgtatttgggattgtgacacgcagacaccaatggtc
actttatcaggacacactaattgggttctatgtgttgcatggtctccagacggtgaattg
attgcaactggttcaatggataacactatcagattatgggaaggtaaaaatggtaaacct
tttggtgaagccatgcgtggtcaccaaaaatggattacctctttatcttgggaaccgttg
cacttggttaaggctggtgaacgcccaaaacttgccacttcttctaaagatggtacaatt
aaagtttgggatacgggaagaagagtttgtctatatacattaagtggtcatgtaaactcc
gtctcttgtgtcaaatggggtggtaaaaatctattgtatagtgggtctcacgataaaact
gttagagtttgggacatgaatttaggtggtaaatgtattaatatattgaaatcacatgcc
cattgggttaaccatctttcattatccactgattatgcattaagagttggtccatttgac
catacaggtattatgccggctacacctgaagaagctagagccaaggctttaaaaaattat
gaaaaggttgcaaaaagaaatggttctgatgaagaattaatggtcacagcaagtgacgat
ttcactatgttcctatggaatccttctaagagtactaaacctatttccaggatgaccggt
catcaaaaattagttaatcatgttgcatttagtccagatggtagatatattgtatcagca
tcttttgataactctattaagttatgggacagtagagatggtaaatttattactacattt
agaggacatgttgccagtgtctatcaagtagcctggtcttcagactgtagattgttggct
tcatgttcgaaggacacttcattaaaagtttgggatatcagaaccaaaaaattatcagta
gatcttccaggacatctagatgaagtctatactgttgattggagtgtcgatggtaagagg
gtatgcagtggtggtaaagataaaatggttagattatggactcattaa

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