Tetrapisispora phaffii: TPHA_0M01830
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Entry
TPHA_0M01830 CDS
T02235
Symbol
TPHA0M01830
Name
(RefSeq) hypothetical protein
KO
K14855
ribosome assembly protein 4
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0M01830 (TPHA0M01830)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TPHA_0M01830 (TPHA0M01830)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR19_1st
NLE
Beta-prop_IFT140_1st
Beta-prop_DCAF4
eIF2A
Beta-prop_Vps41
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_Nup120_160
Ge1_WD40
Tricorn_2nd
Beta-prop_ACSF4
WD40_RFWD3
RMC1_N
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Tricorn_N
Cytochrom_D1
Beta-prop_NWD2_C
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
11531956
NCBI-ProteinID:
XP_003688192
UniProt:
G8C0P3
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Position
13:complement(378923..380470)
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AA seq
515 aa
AA seq
DB search
MATVIPPPSKKQRKAAQQEREVDIIPTSLPNVLVKFQASDTNETLGGSIRVPGAITEKQL
EELLNQLNGTSDDPVPYVFSCNVKGKNKIDPEQIIDIVDNLYSTLLKPGHNTTEDIITLI
YTPRAIFKVRPITRSSAAIAGHGSTILCSSFAPHTSSRMVTGAGDNTARIWDCDTQTPMV
TLSGHTNWVLCVAWSPDGELIATGSMDNTIRLWEGKNGKPFGEAMRGHQKWITSLSWEPL
HLVKAGERPKLATSSKDGTIKVWDTGRRVCLYTLSGHVNSVSCVKWGGKNLLYSGSHDKT
VRVWDMNLGGKCINILKSHAHWVNHLSLSTDYALRVGPFDHTGIMPATPEEARAKALKNY
EKVAKRNGSDEELMVTASDDFTMFLWNPSKSTKPISRMTGHQKLVNHVAFSPDGRYIVSA
SFDNSIKLWDSRDGKFITTFRGHVASVYQVAWSSDCRLLASCSKDTSLKVWDIRTKKLSV
DLPGHLDEVYTVDWSVDGKRVCSGGKDKMVRLWTH
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtaatcccaccaccttctaaaaaacaaagaaaggctgctcaacaagaaaga
gaggtcgatatcatccctacttctctaccaaatgtcttagtgaagttccaagcttcagac
acaaatgaaactttgggtggttctataagagttccaggtgcaatcactgaaaagcagtta
gaagaactattgaatcaattaaacggcacatccgatgatccagttccttatgtcttcagt
tgcaatgttaagggtaaaaataaaattgatcctgaacaaattatagatattgttgataat
ctatattcaacccttctgaaacccggtcacaataccactgaagatattatcactttgata
tacacaccaagagctatcttcaaagtcagaccaatcacacgtagttccgctgctattgct
ggtcatggatcaactattctatgttcctcttttgctccacacaccagctctagaatggtg
acaggtgctggtgacaatactgcacgtatttgggattgtgacacgcagacaccaatggtc
actttatcaggacacactaattgggttctatgtgttgcatggtctccagacggtgaattg
attgcaactggttcaatggataacactatcagattatgggaaggtaaaaatggtaaacct
tttggtgaagccatgcgtggtcaccaaaaatggattacctctttatcttgggaaccgttg
cacttggttaaggctggtgaacgcccaaaacttgccacttcttctaaagatggtacaatt
aaagtttgggatacgggaagaagagtttgtctatatacattaagtggtcatgtaaactcc
gtctcttgtgtcaaatggggtggtaaaaatctattgtatagtgggtctcacgataaaact
gttagagtttgggacatgaatttaggtggtaaatgtattaatatattgaaatcacatgcc
cattgggttaaccatctttcattatccactgattatgcattaagagttggtccatttgac
catacaggtattatgccggctacacctgaagaagctagagccaaggctttaaaaaattat
gaaaaggttgcaaaaagaaatggttctgatgaagaattaatggtcacagcaagtgacgat
ttcactatgttcctatggaatccttctaagagtactaaacctatttccaggatgaccggt
catcaaaaattagttaatcatgttgcatttagtccagatggtagatatattgtatcagca
tcttttgataactctattaagttatgggacagtagagatggtaaatttattactacattt
agaggacatgttgccagtgtctatcaagtagcctggtcttcagactgtagattgttggct
tcatgttcgaaggacacttcattaaaagtttgggatatcagaaccaaaaaattatcagta
gatcttccaggacatctagatgaagtctatactgttgattggagtgtcgatggtaagagg
gtatgcagtggtggtaaagataaaatggttagattatggactcattaa
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