Tetrapisispora phaffii: TPHA_0O00240
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Entry
TPHA_0O00240 CDS
T02235
Symbol
TPHA0O00240
Name
(RefSeq) hypothetical protein
KO
K10755
replication factor C subunit 2/4
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03030
DNA replication
tpf03410
Base excision repair
tpf03420
Nucleotide excision repair
tpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPHA_0O00240 (TPHA0O00240)
03410 Base excision repair
TPHA_0O00240 (TPHA0O00240)
03420 Nucleotide excision repair
TPHA_0O00240 (TPHA0O00240)
03430 Mismatch repair
TPHA_0O00240 (TPHA0O00240)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0O00240 (TPHA0O00240)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0O00240 (TPHA0O00240)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0O00240 (TPHA0O00240)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TPHA_0O00240 (TPHA0O00240)
DNA Replication Termination Factors
ELG1-RFC complex
TPHA_0O00240 (TPHA0O00240)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TPHA_0O00240 (TPHA0O00240)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TPHA_0O00240 (TPHA0O00240)
Check point factors
HRAD17(Rad24)-RFC complex
TPHA_0O00240 (TPHA0O00240)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_22
AAA_11
AAA_assoc_2
RuvB_N
Mg_chelatase
AAA_16
AAA_19
Cdc6_lid
AAA_24
AAA_14
SLFN-g3_helicase
AAA_7
AAA_2
AAA_28
DUF815
AAA_5
AAA_30
ResIII
TIP49_C
DNAX_ATPase_lid
VHL_C
Antiterm
Motif
Other DBs
NCBI-GeneID:
11530665
NCBI-ProteinID:
XP_003688430
UniProt:
G8C1G8
LinkDB
All DBs
Position
15:complement(32729..33787)
Genome browser
AA seq
352 aa
AA seq
DB search
MITGFGNATKKRKIQPEGDLDNNKPWVEKYRPRNLDDVAAQDHAVAVLKRTLGSANLPHM
LFYGPPGTGKTSTILALTKELFGPQLVKSRVLELNASDERGISIVREKVKNFARLTVSKP
SKDDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSTVTRFCLICNYVTRIIDPLA
SRCSKFRFKALDETNALDRLKYVATQESTKYEEGTLEKILQISAGDLRRAITLLQSVSKS
STFNKSDMITIKKVEELAGVVPESIINQILKIIESKDVDAITAFTRTFIKNGWSGAAVVD
QLHDHYITSDNYSTQFKNSVSWILFNADSKLLNGTNEHIQLLNVLVKISLIE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgattacagggtttggtaatgctactaagaaacgtaagatccaaccagaaggtgatcta
gataataacaaaccttgggtggagaaatacagacctagaaatttagacgacgtagcagcc
caagatcatgcagtggctgttttaaaacgtacacttggctctgcaaatctaccacatatg
ttgttttatggtcctccaggtactggtaaaacttctactattctagctttaacaaaagag
ttatttggtcctcaactggtaaaatctagagtgttagagttaaatgcttccgatgagcgt
ggtatttcaattgtaagagagaaagttaaaaattttgctcgtttgactgtttcgaaaccg
tcaaaagatgatttagaaaattatccttgccctccatacaagattattatcctagacgaa
gctgattcaatgactgcggatgcgcaatctgctttacgtagaacaatggaaacttattct
acagttactagattctgtctgatatgtaactacgtcacaagaataattgatccacttgcg
tcaaggtgttccaagtttagattcaaagcattagatgaaacgaatgctttggatcgtttg
aaatatgtggccactcaggaatcaactaaatatgaggaaggtacattggaaaaaatatta
caaatttcagcaggtgatctaagaagggcaattactttgttgcaatcagtttcaaaatca
agtactttcaacaaatcagatatgattactatcaaaaaagttgaggagctggctggtgtt
gtccctgaatctataatcaatcagatattaaaaatcatcgaatcaaaagatgtagacgct
attacagcttttacaagaacctttatcaaaaatggttggtctggtgctgctgttgtcgat
cagcttcatgatcattatataactagtgataactatagcacacaatttaagaatagtgtt
tcatggatactatttaatgcagattctaaattgttaaatggtacaaatgaacatatacaa
ttactcaacgtattggtgaaaatttcattgattgaataa
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