Tetrapisispora phaffii: TPHA_0O01340
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Entry
TPHA_0O01340 CDS
T02235
Symbol
TPHA0O01340
Name
(RefSeq) hypothetical protein
KO
K26124
cullin 8
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpf04121
]
TPHA_0O01340 (TPHA0O01340)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0O01340 (TPHA0O01340)
Ubiquitin system [BR:
tpf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul8 complex
Cullin
TPHA_0O01340 (TPHA0O01340)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
TPHA_0O01340 (TPHA0O01340)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6958
DUF7326
Motif
Other DBs
NCBI-GeneID:
11530669
NCBI-ProteinID:
XP_003688536
UniProt:
G8C1S4
LinkDB
All DBs
Position
15:263505..265889
Genome browser
AA seq
794 aa
AA seq
DB search
MQSEDILVDLEQIDTSGSSNASNLTPLYGKNHIYENELTKLKNILRSSEHTMSPNTISSL
LYRLCSFKLYEPLVIQIEKEKENEGEDLSESKRLKKLRLVKQHSVIQTVWTTVVNELKHY
SSTITSSLDNMRNTIDDENLDSVYHNIIQIFKMLMDYYENVKDIIKFFHFNYPTVIQDEF
PLQLDELEYYQNIALAPLFLEHGDKVRTGFTKWFLSANSAANFQYSKLQLEFMKYLYRSN
PILQGEPFTECLNTCILSFANEIINDIQNNQDDSTNGLNIIITGLKKLVLICWPLGKDII
PIVTEFYIENTLLKEYTAASIIRRCVENCDIKDSGDQIIYKTILECFLDRDLEDLLKDEI
SYAFEDSLKYIFESVKNYSSIKYFIMAVKYINFISNSTIETEKVKFSSFSRIIRESIFNF
LGGDIKVVEKYQKLISLRMKGLSTTHFQLASEDMDTLLCKIPYFLQFDKSFLLDHSNYLF
RRIVMSGPRTLNDLSQNSFEHNLLKTYDEIYQHNDDATGFLNFSLDMRGACSMANEYMNL
HGEEIDLALVPMVFAKKSVPKIFQNTNIDQDIIIPDRFKESWNTFSSFYKAKDKNEYKTL
HQMYSLHHCEVETFYKLPNGENLTFQLTLYQTLILEKFNELDELTVNHIRITLNMTVDTV
LIILQSFLNIHLIKASDKDTYILNNNYSPDLKKVKNSRLRIQLPKTTSSINQKDTHKLKT
LKNREGNLSLWKLELIKAAIVRTVKTHPDRLQFDELIDIVNKQVHDYSVGEFKDALYKTV
LDGAIRQEEHYYIY
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagaggatatattagttgatctagaacaaattgacacttctggttcatcaaat
gcttccaatttaactccactatatggtaaaaaccatatttatgaaaatgaattgactaaa
ttgaaaaatatcttgaggagcagtgaacacactatgtcaccaaatacaatcagctcattg
ttatatcgattatgctctttcaaattatatgaacctttagttattcaaatagagaaagag
aaagagaacgaaggtgaagatttatcagaatcaaagaggttgaaaaaacttcgattggtt
aaacaacattctgttatccagaccgtttggaccactgttgtgaatgaactcaaacactat
tctagtactataacatcatctttagataatatgcgtaatacaattgatgatgaaaacttg
gattctgtatatcataatatcattcaaatttttaaaatgcttatggattattacgaaaat
gttaaggacatcatcaagttttttcatttcaattatcctacggtaatacaagatgagttt
cctttacaactcgatgaattggaatattaccaaaatattgcattggctccattatttcta
gaacatggagataaagttagaacagggtttacaaaatggtttctgtcagcaaattcagct
gctaacttccagtattcaaaattacaactagaatttatgaaatatctttaccgcagtaat
ccaatattacaaggtgaaccttttactgaatgccttaatacatgcatattgtcatttgct
aatgaaataattaatgatatacaaaataatcaagatgactcaaccaatggtctaaatata
ataataacaggacttaaaaagctagtgctgatatgttggccacttgggaaagatattatc
ccaatagtgactgagttttatattgaaaatactttattaaaagaatacacagctgcaagc
attatcagaagatgtgtagaaaactgtgatatcaaagattctggagatcaaataatttat
aagactattttggaatgctttcttgacagagatttagaagatttgttaaaagatgaaata
agttatgcgtttgaagatagtttgaaatatatttttgaatcagttaaaaactactcgtca
attaagtatttcataatggcagttaaatatattaatttcattagtaattcaactatagaa
accgaaaaggtaaaatttagtagcttttcgagaataatcagagaaagtatattcaacttc
ttaggtggtgacataaaagttgttgaaaaatatcaaaaattaatctctttgaggatgaaa
ggtttaagcactacacattttcaattagcttcagaagatatggatacattattatgtaaa
ataccatattttttgcaatttgataaatcatttttattggatcactcaaattacttattt
agaagaattgttatgagtggtccacgaacactaaatgatctatcacagaattcttttgag
cacaatttattgaaaacctacgatgaaatttatcaacataatgatgatgccactggattc
ttgaacttttcattggatatgagaggagcatgttcgatggcgaacgaatatatgaatttg
catggtgaagaaattgatttggcattggtaccaatggttttcgctaaaaaatcagtacct
aaaatctttcagaataccaatattgatcaggatataataatacctgaccgttttaaagag
agctggaatactttttcgtcattctacaaagcaaaagataaaaatgaatacaaaacttta
caccaaatgtattctttacatcattgtgaggtggaaacattttacaaactaccaaatggt
gagaatttaacatttcagttgacattatatcaaactttaattctcgaaaaattcaatgag
cttgatgaattgactgtaaatcatatccgaattactttaaatatgacagttgacacagtt
ttaataatattgcagtcttttttaaacattcacctaataaaagcatctgataaagacaca
tatattcttaataataattattctcctgatttaaagaaggtcaaaaacagtagattacgc
attcaattacctaaaacaacttcatcaattaatcaaaaggatacacataagttgaagact
ttaaaaaatagagaaggaaatctttcattatggaaacttgagttgataaaagctgcaata
gtaagaactgtaaaaactcatcctgacaggcttcaatttgatgagttaattgatattgtt
aacaaacaagtacatgactatagtgttggtgaatttaaagatgctttatataaaacagta
ctagatggagctatcagacaagaagagcattattatatttattaa
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