Tetrapisispora phaffii: TPHA_0O01610
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Entry
TPHA_0O01610 CDS
T02235
Symbol
TPHA0O01610
Name
(RefSeq) hypothetical protein
KO
K14829
pre-rRNA-processing protein IPI3
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0O01610 (TPHA0O01610)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
TPHA_0O01610 (TPHA0O01610)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
KNTC1_N
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Spectrin_Anc-1
Csm1_N
PKcGMP_CC
Mod_r
DASH_Dam1
Motif
Other DBs
NCBI-GeneID:
11530643
NCBI-ProteinID:
XP_003688562
UniProt:
G8C1V0
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Position
15:319614..321224
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AA seq
536 aa
AA seq
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MNEQIIYTTNATGAIASIHSFEQSNLRQCNVDSLNSAVQVGDKYLFVAQAKKALINVYDI
SGLQKRESVEQRLPLPEIVSCLEVVPNSTDIGTNDNIPYLLLASTPSGKVYVWEVSSGIL
LSVKPMAHYQAITKIKSILGGKYIVTAGKDSRLMIWQTTDFVSSEEPRPVAILHDHTLAV
TDFVVSTTYGDYLSSSGTKLYTASQDATVRCYELNTLATQMPIGKKLDSNDANLLQPKLL
VTFTLPYAVATLSLDQADRALYIGTSKGCFNLPLFYQLPGNRIVNLTQSISEKLTSKGKV
FSLTELLPGQDEHQKPQDLFAIGQILMNKISDLDVKCSQLSLDGSQLVIGDATGKISIIE
IFSKQILRTISPATTQQDSVGSVTNLLISTQYKESSHIELFNGSKSDSGKTQKLPALQRA
IFDNKKEGTLHDIWNQFKSPAFETVAPLEDFETYLDNMKNQESVFLTESNRDSNSINTVT
ANTENNTNASENSSKDKEIQELKNNVQSLTDAYKELREMHEKLLTENETQLQKDST
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcaaattatatacactaccaacgctactggtgctattgctagtattcattct
tttgaacagtcaaatctaagacaatgtaatgtggattcacttaatagtgccgttcaagtt
ggtgataaatatttatttgttgctcaagctaagaaggcattgatcaatgtctacgatata
tcgggattacaaaagagagaatcagtggaacagagattacctttaccagagatcgttagc
tgtttagaggttgtcccaaattcaacggacatcggtaccaatgataatattccttatttg
ttgttagcctccacgccgtctggcaaagtttatgtttgggaggtgagttcaggtatttta
ctctcggtgaaaccgatggcgcattatcaagccatcactaagatcaagtccattttaggc
ggtaagtatattgtcactgctggtaaggattctcgtttaatgatctggcaaacaaccgat
tttgtcagttctgaagaacctagacctgtggcaattttgcatgatcataccctagctgtt
actgattttgtagtctctactacgtatggggactatctttcatcttctggtacaaagtta
tatactgcttctcaggacgctactgtaagatgttacgaattgaatactttagccactcaa
atgccaattggtaagaaattagatagcaatgatgctaatttactacaaccaaaactgtta
gtaacgtttactttaccgtatgccgtagctaccctttcattagatcaagcggatagggcg
ctatacatcggcacgagcaaaggttgtttcaatctacctctattctaccaattacctggg
aatagaattgtcaatttaacacagtctataagtgaaaaattgacaagcaaaggtaaagtc
ttttccttaacggagcttctacctggacaggacgagcatcagaagcctcaggatttattt
gccattggccagatcctgatgaacaaaatcagtgatttagatgttaaatgttcccagtta
tctctagacgggtcacaattagtaattggtgatgcaactggcaaaatatcgattattgaa
attttctccaagcaaatattgaggacaatttctcctgcaactactcaacaggactccgta
ggaagcgtaactaatcttctaataagcacacaatataaagaatcctcgcatattgaatta
ttcaatggttctaaaagtgactctggcaagacgcagaaactaccagctttgcaaagagct
atcttcgataataaaaaagaaggaactttgcacgatatttggaaccaattcaagtctcca
gctttcgagacagtagcaccactagaagatttcgaaacttatcttgataacatgaaaaat
caagagtccgtattcttaacagaatcaaatagagattccaacagcatcaatacggttact
gcaaacacagaaaacaacacaaatgcctctgaaaactcatcaaaggacaaagaaatccaa
gaattgaagaacaacgttcagtcactaactgacgcctataaggaactacgagaaatgcat
gaaaagttattaactgagaacgaaactcaacttcaaaaggattcaacctga
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