Tetrapisispora phaffii: TPHA_0P00480
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Entry
TPHA_0P00480 CDS
T02235
Symbol
TPHA0P00480
Name
(RefSeq) hypothetical protein
KO
K14309
nuclear pore complex protein Nup93
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TPHA_0P00480 (TPHA0P00480)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0P00480 (TPHA0P00480)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TPHA_0P00480 (TPHA0P00480)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
11530862
NCBI-ProteinID:
XP_003688640
UniProt:
G8C228
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Position
16:complement(99165..101735)
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AA seq
856 aa
AA seq
DB search
MSVNEVPVDQRLENDHVQNNNGTSKLFDELVASSKNLPSSSSDLGLIQLSYDELILRAKK
LRNEAHNGSATKNYTKAHYLLAGSGISMEEFDSLYDTLRTDMSQETQNKNLKIHPISDVS
SVASKELNKAQEQSEFRQNNILYSIEKLLSTTEKEFDYSINQVLNLDWDQRKEEVELNFK
KMLKSKNIYNSNRKVNNEVNHFSSPNSQSNFDVNENQLTRMKFERYASIIYVFNNNRQNK
QPFSLIDEYNNFLPSLDNENDKNMLKCCKILKSKLNNNNVVEDSKIYLENEFKQYLNTIS
IQFSRPEFNFSSNPILQANIERAIVFLNMKLKNKKGNWTINNLTVIDNVPVWALVFYLMR
AGLLEEALEVLNKSKPHLKKIEQPFLAYFKAYTFSKDRKLPLEFVAKLNSEFNQHIKNSF
DGDLFRLAVYKIIGKCDLSRKSIPSVLLTVEDWVWFHFILITDPTESSYSVYESFSLEEF
QNITMSHGPNKLGNNYLEVLILCGLYSEAVQYLSEFDEINSVHLYISLIDKKLIDHQNKS
GVNGINFASIINSYIRSFKFSDPRIAAEYITLITLCNDNEQLELCKEAFLHLVLDTKEFT
ILLGKVNRDGVKLPGVLSQRLELLKLDNPEKFINEVIQRAIVQADEEERVSDSLLLCQLS
KQYDMVIKIINEQLSELLSESELDSNLVQIVDNIETNAILFAENLVLQYSKDAEIIAKID
NKSFNTTKLLIKISKARALFTKENWRECLSEIEALNIIPLRNELEASKGAHSLPTLDKYL
IKNIPNILLMVMTCAKRIYENTNRIIKQHTQATNDIEELKKITRNCMIYAGTIQYKMPRD
TYRALTVLDLNREYIY
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttaatgaggtacctgtcgatcaaagactggaaaatgatcatgttcaaaataat
aatggaaccagtaaattatttgacgagttagttgcatcttctaagaatttaccttcgagc
tcttcagatttggggcttatccagttaagttacgacgaattgatcttaagagccaagaaa
ttgaggaacgaagcacataatgggagtgcaacaaaaaattatacaaaagcacactatctg
ttagctgggagtggtatctctatggaagaatttgatagtctatatgatactctgagaact
gacatgtcacaagaaactcaaaataaaaatttaaagatacatcctatcagtgatgtgtca
agtgtagcttcaaaagagcttaataaagctcaagaacaatcagaatttagacaaaataac
attttatattccattgaaaaattactgtctactactgaaaaagaatttgattattctatt
aaccaagttttgaatttagattgggaccaaagaaaggaggaagttgaattaaatttcaag
aaaatgctaaagagtaaaaacatttataatagcaatcgtaaagttaataatgaagtcaac
catttctcttctccaaattcacaatcaaattttgatgttaatgaaaaccaactaacaaga
atgaaattcgaaagatatgcttcaattatatatgtattcaataataatagacaaaacaaa
cagcctttttcattaattgatgagtacaataacttcttaccttcattagataatgaaaat
gacaaaaatatgttgaaatgttgtaaaatattgaaatctaaattgaataataacaatgtt
gttgaagattcaaaaatatatctagaaaatgaatttaaacaatatttaaatactatatcc
attcaattttcgagacctgaattcaacttctcaagtaatccaattttacaagcaaatatc
gaaagagcaattgtttttttgaatatgaaacttaaaaataaaaaaggaaattggacgata
aacaatttaacagttattgataacgttccagtatgggctttggtattctatttaatgaga
gcaggtttattggaagaagctttggaagtcttaaataaaagcaaaccacatttgaaaaaa
attgagcagcctttcctagcttactttaaagcatatacattctcaaaagataggaaatta
ccattggaatttgttgctaaactaaattcagaattcaatcaacatattaagaattcattt
gacggagatctctttaggttggctgtttataaaattattggtaagtgtgatttatctagg
aagtctataccttcagttctactgacagttgaagattgggtttggttccatttcatttta
attaccgatccaactgagagcagttattctgtttatgaatctttctctttagaagaattc
caaaatattacaatgtcacatggaccaaacaaacttggtaacaattacttagaagtttta
atattatgtggtttatattctgaagcagttcaatatttatctgagttcgatgaaattaac
agtgtccatttgtatatatcgttaattgataaaaaattgatagatcaccaaaataagtct
ggagttaatggtattaattttgcatcaatcataaattcgtacattcgatcatttaaattc
tcagatcctaggattgcagctgaatatattacgttaattactctatgtaatgataatgaa
cagctcgaattatgtaaagaagcctttttacatttggttttggatacgaaagaattcaca
atattattgggtaaggttaatagagatggggtaaagcttcctggtgttttaagtcaaaga
ctcgagttgttaaaattagacaatcctgaaaagtttataaatgaggtcattcaaagggca
attgttcaagctgatgaagaagagagagtaagtgatagtctattgctatgccaactttcc
aaacagtatgatatggtaataaaaataattaatgaacaattaagtgaattattaagtgaa
tcagaattggatagtaacttagttcaaattgtggataatattgaaactaatgctattttg
tttgctgaaaatttggttttgcaatactctaaagatgcagaaataattgctaaaattgac
aataaaagctttaatactactaaactgttaataaagatttcaaaagctagggctctattc
acgaaagagaattggcgtgaatgcctttccgagatcgaagctctaaatattatcccactt
cgcaatgaattagaagcttcaaaaggtgctcattcattaccaacgctagataaatatcta
atcaagaacattccaaatattttattgatggtaatgacatgtgctaaaagaatatatgag
aatactaatagaataatcaagcaacacactcaagccactaatgatattgaagaactgaag
aaaataacaagaaactgcatgatatatgcaggtaccattcaatataagatgcctagagat
acatatagagcactaaccgttctggacctgaatcgtgaatacatatattag
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