Tetrapisispora phaffii: TPHA_0P01090
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Entry
TPHA_0P01090 CDS
T02235
Symbol
TPHA0P01090
Name
(RefSeq) pumilio-family RNA binding domain-containing protein
KO
K14844
pumilio homology domain family member 6
Organism
tpf
Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpf03019
]
TPHA_0P01090 (TPHA0P01090)
03009 Ribosome biogenesis [BR:
tpf03009
]
TPHA_0P01090 (TPHA0P01090)
Messenger RNA biogenesis [BR:
tpf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
TPHA_0P01090 (TPHA0P01090)
Ribosome biogenesis [BR:
tpf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
TPHA_0P01090 (TPHA0P01090)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF_NOP9
PUF
InvH
Motif
Other DBs
NCBI-GeneID:
11530925
NCBI-ProteinID:
XP_003688701
UniProt:
G8C289
LinkDB
All DBs
Position
16:complement(221871..223820)
Genome browser
AA seq
649 aa
AA seq
DB search
MAPVTKKSKENANKRSSNSKASAKPAKKARISVDSSDEDELDNTATEEVSSKEDALDDVI
SDDDEEEQKEDLEDEDKDDDDKTENNKATGENASSHVEQRKLLKERKMQRKGGSEVQHIK
SLWERLRVKTPPMPRPVREKLSNEIWELAKDCISDLVLKHDASRVVQTLVKYSSKERRDQ
VVNALKGKYYLLATSAYGKYLLVKLLHYGSKQSRQLIIDELHGTLRKLMRHREGAYVVED
LFVLYATNEQRQQMIKEFWGSEYAFFRESHKDLTIEEVCESSTEKRNIIARNLITTITAS
VEKGSTGFQILHAAMREYVKIASEKEITEFIELLQEQLAELVHTPEGADVACTLIAKANA
KERKALIKNLKNHADKLIKNEHGNMVFITLLLTVDDTVLVFKSFGPSIKEIFSELVIDKF
GRRPLLYILLGLDGRFFSPILKKELERYIKMSEATSKKPIDTKRAELLNKFAPLFVSSVS
KSSAEILTENLGSQFISELLLNDDLYEQLSEKEIKNFNSIIENIMITFKGDIIEEDHPIH
RPFSTRLLRGLIQGGKWNNKEKQIIPLSNVEGLGTPFAAKFYDDIIDSSNLLDWINNRDS
AFTIVAIYETLSKSKNEGKQFLTDLKSVLKNVEADESNKGAQLLIKLAK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgacaaaaaaatctaaggaaaatgctaacaaacgttcttccaatagcaag
gcttctgctaaaccagctaagaaggctagaatttcagtggactcttctgatgaggatgaa
ttagacaatactgccacggaagaagtctcatccaaagaagatgctttagatgatgtcatt
tctgatgatgatgaagaagaacaaaaggaagatctagaagatgaagacaaagacgacgac
gacaaaactgagaacaataaagccaccggtgaaaatgccagttcccatgttgagcaaaga
aaattgttaaaggaaagaaagatgcaaagaaaaggtggttccgaggttcaacatattaaa
tctttatgggaaagattacgtgtaaagactccaccaatgccaagacctgtgcgtgaaaaa
ctatccaacgaaatttgggaattagctaaagattgtatcagtgatttagtcttaaaacat
gatgcttctcgtgttgttcaaactttagtcaagtattcttccaaagaacgtcgtgaccaa
gttgtcaacgctttaaagggtaaatactatttgttagctacttcagcttatggtaaatat
ttacttgttaaattattacattatggttcaaagcaatcaagacaacttatcattgatgaa
ttgcatggtaccttaaggaaattgatgagacatcgtgaaggtgcttatgttgtcgaagat
ttatttgtattgtacgctactaacgaacaaagacaacaaatgatcaaagaattttggggt
tctgaatatgcttttttcagagagtcccataaagacttaactattgaagaagtttgtgaa
tctagtactgaaaagagaaatattattgccagaaatttaattacaacaattactgcctct
gtagaaaaaggttccactggtttccaaattttacatgctgcaatgagagaatacgttaaa
attgcaagtgagaaagaaatcactgaattcattgaattattacaagaacagttagctgag
ttagttcacacaccagaaggtgctgatgttgcatgtactttgattgctaaagctaatgct
aaggagagaaaggcactaatcaaaaacttaaaaaatcatgctgataaattaattaaaaat
gaacatggtaacatggtttttatcactcttctgttaacagttgatgataccgttttggta
ttcaaatcttttggaccatccatcaaagaaatattctcagaactggtaattgataaattt
ggaagaagacctttactatatatccttctaggtttagatggcagatttttttccccaatt
ttaaagaaggaattagaaagatatattaaaatgtcagaagctacttccaagaagcctatc
gatactaaaagagctgagttactaaataaatttgctccattatttgtaagttctgtttct
aaaagttctgctgaaattttaaccgaaaacttaggtagtcaatttatttctgaactttta
ttaaatgatgatctatacgaacaattaagtgaaaaggaaatcaagaatttcaacagtatt
atagaaaatattatgattacatttaaaggtgacataattgaagaagatcatccaatccac
agaccattttctactagattattaagaggtttaattcaaggtggtaaatggaacaataaa
gaaaagcaaataattccattatcaaacgttgaaggtttaggtactccattcgctgcgaaa
ttctatgatgacattattgattcttccaacctattggattggataaacaatagagatagc
gctttcactatcgttgcaatctatgaaactttaagcaagagtaaaaatgagggtaagcaa
tttttaaccgatctaaagagtgttttgaagaatgtcgaagcagatgaatctaataaaggt
gctcaattattaataaaattagccaaatag
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