Tetrapisispora phaffii: TPHA_0P01200
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Entry
TPHA_0P01200 CDS
T02235
Symbol
TPHA0P01200
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
tpf
Tetrapisispora phaffii
Pathway
tpf03030
DNA replication
tpf03410
Base excision repair
tpf03420
Nucleotide excision repair
tpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPHA_0P01200 (TPHA0P01200)
03410 Base excision repair
TPHA_0P01200 (TPHA0P01200)
03420 Nucleotide excision repair
TPHA_0P01200 (TPHA0P01200)
03430 Mismatch repair
TPHA_0P01200 (TPHA0P01200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpf03032
]
TPHA_0P01200 (TPHA0P01200)
03036 Chromosome and associated proteins [BR:
tpf03036
]
TPHA_0P01200 (TPHA0P01200)
03400 DNA repair and recombination proteins [BR:
tpf03400
]
TPHA_0P01200 (TPHA0P01200)
DNA replication proteins [BR:
tpf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TPHA_0P01200 (TPHA0P01200)
DNA Replication Termination Factors
ELG1-RFC complex
TPHA_0P01200 (TPHA0P01200)
Chromosome and associated proteins [BR:
tpf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TPHA_0P01200 (TPHA0P01200)
DNA repair and recombination proteins [BR:
tpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TPHA_0P01200 (TPHA0P01200)
Check point factors
HRAD17(Rad24)-RFC complex
TPHA_0P01200 (TPHA0P01200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
AAA_lid_RFC1
Rad17
AAA_14
AAA_assoc_2
RuvB_N
AAA_22
ResIII
AAA_11
DUF815
AAA_24
AAA_16
AAA_30
AAA_7
AAA_5
DEAD
bpMoxR
nSTAND_NTPase5
AAA_28
SLFN-g3_helicase
Viral_helicase1
Mg_chelatase
nSTAND3
AAA_3
AAA_19
AAA_18
RNA_helicase
TIP49
ATPase_2
IstB_IS21
Acyl-CoA-dh_C
AAA_2
nSTAND6
Motif
Other DBs
NCBI-GeneID:
11530906
NCBI-ProteinID:
XP_003688712
UniProt:
G8C2A0
LinkDB
All DBs
Position
16:complement(242758..243765)
Genome browser
AA seq
335 aa
AA seq
DB search
MNRAEKNLENLPWVEKYRPSSLDEVYGQPDIVNTVRKFVAEGKLPHLLFYGPPGTGKTST
IIALAKEIYGKNYSNMVLELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAM
TNAAQNALRRIIEKYTKNTRFCILANYAYKLTPALLSRCTRFRFQPIAIDALERRMNNVV
LQEHLNIGQEAKDALLKVSKGDMRRIMNVLQASKSSVDTADGEITREIIYECCGICRPED
VQKILKSILEDDFGTAYLTLKQICQAKGLASIDIIEELVALLECYELKNERTRQETLVCL
SEIEYSISKGCNNKIVQSAIIGAIKTAFEHETASA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagcagagaagaatctcgagaacctgccatgggttgagaaatatagaccatct
tctttggacgaagtgtacggccaaccagacattgtgaatactgttcgtaagtttgttgct
gaaggtaaattgccccatcttttgttctacggtcctcctggtacaggtaagacctctact
atcattgcgttggccaaagaaatttatgggaagaattattccaatatggtgcttgagttg
aatgccagtgacgacagaggtatcgatgttgttaggaaccagatcaaggattttgcctcc
acccgacagatcttcagtaaaggtttcaaattgatcatcctggatgaggctgacgcaatg
accaatgctgctcaaaacgccctaagaagaatcatcgaaaaatatactaagaacaccagg
ttctgtatcttggctaactacgcatataagctgacaccggccttgttgagtagatgcacc
aggttccggttccagccgatcgcgattgatgccctggagcgtcgtatgaacaacgtcgtc
ttacaagaacacttgaacattggccaggaggccaaggacgctctgttgaaggtgtccaag
ggggacatgaggagaatcatgaacgtgctgcaggcgtcgaagagctctgtggacacagcg
gacggggagatcacaagagagatcatctacgaatgctgtgggatctgcagaccggaagat
gtgcagaagatactgaaaagcatactggaggacgacttcggcacggcatatctaacattg
aagcagatctgccaggccaagggcctggcatccatcgatatcatcgaggaactagtagcg
ttgctcgagtgctacgaattaaagaacgagagaacaagacaagagacactcgtctgtctg
agtgaaatcgaatactccatctccaagggctgcaacaacaagatcgtccaaagcgccatc
atcggcgccatcaagaccgccttcgagcatgaaacagcatccgcatga
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integrated database retrieval system
