Treponema pallidum subsp. pertenue Gauthier: TPEGAU_0643
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Entry
TPEGAU_0643 CDS
T01750
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tpg
Treponema pallidum subsp. pertenue Gauthier
Pathway
tpg03030
DNA replication
tpg03430
Mismatch repair
tpg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPEGAU_0643 (dnaQ)
03430 Mismatch repair
TPEGAU_0643 (dnaQ)
03440 Homologous recombination
TPEGAU_0643 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tpg03032
]
TPEGAU_0643 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tpg03400
]
TPEGAU_0643 (dnaQ)
Enzymes [BR:
tpg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPEGAU_0643 (dnaQ)
DNA replication proteins [BR:
tpg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPEGAU_0643 (dnaQ)
DNA repair and recombination proteins [BR:
tpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPEGAU_0643 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEZ59905
UniProt:
A0AAU8PUB9
LinkDB
All DBs
Position
706573..707220
Genome browser
AA seq
215 aa
AA seq
DB search
MIYDWVFAVHEHVAFTAFDTETTGLKAEEDRIIEIGAVTFDRKGIIARFSTLIFPDRAIP
PDVSKINHITDDMLVNKPRFCEIVSDFSRFIKGTVLVAHNANFDVEFLNAELSLCKKQPL
SHKVVDTYAMAQAVFPGLGRHQYRLQNLALQFGLTVHAAHRAEDDARVCMELFTTMIAHH
AKQNGHCVNHAQSPTIKKLIQEIQASSTDCSQELF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgattgggtttttgcggtgcatgaacacgttgcattcaccgccttcgacacc
gaaacaactggtttaaaagcagaagaagatcgcattatagaaattggtgcagtaacgttt
gatcgaaagggtattattgcgcgctttagcacgctcatcttccctgatcgggctataccc
cctgacgtgagcaaaatcaaccatattaccgacgatatgctcgtcaataagccgcgcttt
tgtgagatagtttcagacttttctcgattcatcaaagggacagtactcgtcgcacataac
gcaaacttcgatgtcgagtttctcaatgcagaactcagcctgtgcaaaaagcaacccctg
tctcacaaagtagttgatacgtacgcgatggcccaagcggtgttccccgggttaggacgc
catcagtaccgtctgcagaatcttgcacttcagtttggacttacggtacacgcagcacac
agagcagaggatgacgctcgagtatgcatggagctttttacaactatgatcgcacaccac
gccaaacaaaacggacactgtgtaaatcatgcacaaagccccaccataaaaaaattaata
caggagatacaggcatcgagcactgactgttcccaggagctgttttag
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