Treponema pallidum subsp. pallidum Chicago: TPChic_0229
Help
Entry
TPChic_0229 CDS
T01868
Name
(GenBank) DNA polymerase, bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tph
Treponema pallidum subsp. pallidum Chicago
Pathway
tph03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TPChic_0229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tph03400
]
TPChic_0229
Enzymes [BR:
tph01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TPChic_0229
DNA repair and recombination proteins [BR:
tph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TPChic_0229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADD72368
LinkDB
All DBs
Position
238643..239455
Genome browser
AA seq
270 aa
AA seq
DB search
MYAVYGRLSPMHAGDRESIARFVRVVRDCLDLFRTEGIGPRPRNDSVILPNAACSPRNHA
GKRAQSTADACVRSSDGSVYTDETLREEIFACRACELYQRRTHAVVGEGVADADVLVVGE
APGAEEDRSGRPFVGRSGKLLDAMLAAIGLSRQQNCYITNVVKCRPPRNRTPTPHETACC
ARFLHAHLTLHRPCAILVLGRCAAQHMLQTTDGIGKLRGRFFTYQGIPLLATYHPSALLR
DEALKRPAWEDLKTFRARLLQLKQDAHMPI
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagtttatggtaggctcagtcctatgcacgctggggacagagagagtatcgca
cgcttcgtgcgtgtggtgcgcgattgtctggatttgtttcgcaccgagggtattgggccc
cgtcctaggaatgattcggtaattttaccgaatgctgcgtgttcaccgcgtaatcatgca
ggaaagcgtgcgcagagcactgccgatgcgtgtgtgagaagcagtgacgggtctgtatac
acggacgaaaccttgcgcgaggaaatttttgcatgccgtgcgtgtgaattgtatcaacgg
cgtacacatgcggtggtgggagagggtgttgcagacgcagacgtgctcgtcgttggggag
gcccctggagcggaagaagatcgaagcggtcgtccgttcgtaggacggtcaggtaaattg
ctggacgcaatgcttgcggcgattggactttcgcgtcagcaaaattgttatatcaccaat
gtggttaagtgccggccgccaaggaaccgcacaccaacaccccacgagactgcctgttgt
gcacggttcctccatgcgcatcttacgctgcatcgcccgtgtgctattttggtgctcggc
cgctgcgccgcacagcacatgctccaaacaaccgatggtattggcaagttgcgcgggcgc
ttttttacctatcaggggattccccttctggctacgtaccatccgagtgcgttgttacgg
gatgaagcgctgaaacgtccggcgtgggaggatctcaaaacgtttcgtgcacggttgctg
cagttgaagcaggacgcacacatgccaatataa
DBGET
integrated database retrieval system
