Treponema pallidum subsp. pallidum Chicago: TPChic_0623
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Entry
TPChic_0623 CDS
T01868
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tph
Treponema pallidum subsp. pallidum Chicago
Brite
KEGG Orthology (KO) [BR:
tph00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tph01011
]
TPChic_0623
Enzymes [BR:
tph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TPChic_0623
Peptidoglycan biosynthesis and degradation proteins [BR:
tph01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TPChic_0623
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
ADD72728
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Position
678367..680064
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AA seq
565 aa
AA seq
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MTVPTTYAYPAHRRFFSLYAVFNAHGASLVLPTQDMLGWLPPRAKRAYRRLTVFLREIIT
ARACSLFLFLLRCFPAGPCARARRLSFLLFLCGAAACPPLWGAYAAHHALRAQSVPDTLI
QRALVLGPLVHPLYPPMQSFKEQYRSARYREYLSVVMQRSAPYRPFIEKLLRDAHLPVEL
LFLPVVESGFLERAVSKSGAVGIWQFMRNSIAGSAMRVSDWVDERRDPWKASVAAVKKLQ
WNYTQLRDWPLALAAYNCGLGAIKRAIAQAGTADFWHLSERGFLRDETVRYVPKFLAVAE
VLSRSHEHGIAWGAAHTPEETTTVTVSRAVDLNLLAQAAGMDAQLLHTLNPALRYSITPP
NAAYTLRVPSTHAQAVQAVLNRPGAVLVHHTLHTIRSGDTLYALARRYGLGVDTLKAHNR
AHSATHLKIGQKLIIPTIRTGQTRRAPLRGAGTRAPGVMDQKEHAVPEVSALPSSSMTPP
TPGGADTRAGADAPAPPSVPPPPESTAARATPAAPFVGKHVVQQGDTLWSLAKRYGVSVE
NLAEENNLAVDATLSLGMILKTPRR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtaccgacaacgtacgcatacccggcgcaccgccgcttcttttccctttacgcg
gtgttcaacgcgcacggcgcatcccttgtgctccccacgcaagacatgctaggctggctg
ccaccgagggcgaagagagcgtacaggaggttaacggtttttttgcgagaaatcattacc
gcccgtgcgtgttcactcttcctgtttctccttcgttgtttccctgctggtccctgtgcg
cgggcgcgccggttgtccttccttctgtttctctgtggtgcggcagcctgccctccgctt
tggggggcgtacgcagcgcaccacgcgttgcgcgctcagtcggtacctgacaccctcatt
cagcgcgcgctcgtgctcggtccgctcgtgcaccccctgtacccgccgatgcagtccttc
aaagaacagtaccggagcgcgcgttaccgggaatacctctctgtcgttatgcagcggagc
gcgccctaccgcccctttatcgaaaaactgctgcgcgacgctcaccttcctgtcgagctg
ctctttctccccgttgtcgaatcgggctttctcgaacgggctgtctccaaatccggcgca
gtcggcatttggcagttcatgcgcaatagcatcgcaggatctgccatgcgcgtgagtgac
tgggtagacgaacggcgtgacccctggaaggcttccgtcgccgcagtcaaaaaactgcag
tggaattacacgcagctgcgtgactggcccttggccctcgctgcgtacaactgcggtctt
ggcgcgatcaagcgagccattgcccaggcaggaaccgccgatttttggcatctgagtgag
cgcggctttctgcgcgacgagacagtccgctatgtcccaaagttccttgcggttgcagaa
gtactcagccggagccacgagcacggcatcgcctggggagcggcacacacccccgaggag
accaccacggttaccgtttcgcgcgcggtagacttaaacctcttggcacaggcagcaggg
atggatgcgcaattgttgcacacgctcaaccctgcactccgctattcaattactcccccg
aatgcagcgtacaccctccgggtgccaagcacacatgcgcaggcggtccaggcagtactc
aaccgcccaggcgccgtgctcgtccatcacaccctgcacaccatccgttcaggagacacg
ctttacgcactcgcccgccgctatgggttgggcgtcgatacgctaaaagcccataaccgc
gcacacagcgccactcacctgaagattggacaaaagctcatcattcccaccatccggact
gggcagacccggcgcgcgcccctgcggggggcaggcacgcgtgcacctggagtaatggat
cagaaagagcatgcagtgccggaagtgtccgcacttccctcgtcctcaatgacgccgccg
acgcccgggggcgcggacacgcgcgcgggagcagacgcgccggcacccccgagcgtgcca
ccaccgccggaaagcacagcggcgcgggcaacccctgcagcaccctttgtcggcaagcat
gtagtgcagcagggggataccctctggtccttagcaaagcgctacggcgtttcagtagaa
aacctggcagaggaaaacaatctagcagtagacgccacgctctccttgggaatgattctc
aaaacgccgagacggtag
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