KEGG   Treponema pallidum subsp. pallidum Chicago: TPChic_0644
Entry
TPChic_0644       CDS       T01868                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
tph  Treponema pallidum subsp. pallidum Chicago
Pathway
tph00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:tph00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    TPChic_0644 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:tph01007]
    TPChic_0644 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tph03016]
    TPChic_0644 (lysS)
Enzymes [BR:tph01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     TPChic_0644 (lysS)
Amino acid related enzymes [BR:tph01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   TPChic_0644 (lysS)
Transfer RNA biogenesis [BR:tph03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    TPChic_0644 (lysS)
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1g tRNA-synt_1e tRNA-synt_1 Anticodon_2
Other DBs
NCBI-ProteinID: ADD72749
LinkDB
Position
complement(706689..708275)
AA seq 528 aa
MSICEKSLHWADKVAHKIIKERADCDQYTCASGITPSGTVHIGNFREIISVDLVVRALRD
QGKSVRFVHSWDDYDVFRRIPDNVPAQDELKQYIRMPITSVPDPFQQEDSYARHHEREIE
SALPEVGIYPEYVYQSKQYQAGVYAQEIKIALDNRHRIQAILNEYRDEQHKISGTYWPVS
VFCTACHKDCTTVDAWDSHWCLQYHCECGHGEQVDLRQTSAVKLSWRVDWAMRWSKEHVV
FEPAGKDHHSQGGSFDTARLISDHIYHWPAPVSFRYDFIGLKGLPGKMSSSAGKVVGLRD
VLEVYQPEVLRYLFVSTRPNTEFSISFDLDVLKIYEDYDKSERVAWGIHAAKSEHEFMRH
KRIYELSQVRGMPPCISYQVPFRHVCNILQINSGDISAVLAFFSDIHKDQIERFVRRCQC
AWNWIRDAGAPDDFKFTLKEDGVRVPLSAEITEALRLIRDTLVPRTDVLSEKELSAELYA
VARQIPVGSKELFTALYQVLIGKNQGPRLAGFMKVIGTQRLHRMLSVY
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgagtatctgtgaaaagtcacttcattgggctgacaaggttgcgcacaagattatcaag
gaacgtgctgactgtgatcaatacacctgtgcatcggggattaccccctcaggaacggta
catattggtaatttcagagagattatttccgttgaccttgtagtgcgggccctgcgtgac
caggggaaatcagtgcgctttgtacattcgtgggacgattatgacgtttttcgtaggatt
cccgacaatgtacctgctcaagatgaattgaagcagtatattcgcatgcctatcacttca
gttcctgatccctttcagcaggaagatagctacgcgcggcaccatgagcgggaaattgaa
tcggcgctcccggaggtaggtatttatcctgaatacgtttatcagtcaaagcaataccag
gcgggggtatacgcacaggaaataaagattgcgctcgacaatcggcaccgtattcaagcg
attttaaacgaatatcgagatgagcagcataaaatcagtggaacgtattggcccgtatcg
gtgttttgtacagcgtgccataaagactgcaccacggttgatgcgtgggatagccactgg
tgtcttcagtatcattgcgagtgtgggcatggggagcaggtggatttacgccagacgtct
gcggtaaaacttagctggcgcgttgattgggctatgcggtggagtaaggagcatgtggta
tttgagcctgcagggaaggatcatcattctcagggaggttcttttgacactgcgcgttta
atttctgatcacatttatcactggcctgcgcctgtttcttttcgttatgattttattgga
ttaaaaggtttgcctgggaagatgtcttcgtccgcgggaaaagtggttgggctgcgtgat
gtgcttgaagtatatcagcctgaagtattgcgatacctttttgtttccacacgtccaaat
accgagttttccattagttttgatcttgatgttcttaagatatacgaggattacgataaa
agtgagcgtgttgcgtggggaatacatgcggcaaaaagcgaacacgaatttatgcggcat
aaaaggatctacgaattgtcacaagtgcgtggtatgccgccgtgcatttcgtaccaggta
ccattccggcatgtatgcaatatattgcaaattaattcgggagatatttctgcagtgctc
gcgtttttctctgatatacacaaagatcagatagagcgctttgtgcgccgttgccaatgt
gcgtggaactggatccgggacgctggtgcacccgatgactttaaatttaccctgaaagaa
gatggtgtgcgcgtgccgctctctgcagagataactgaagcactgagactcattcgtgat
acgcttgtgccacgcactgacgtactcagcgaaaaggaactttctgctgagttgtatgcg
gttgccagacagatacctgttggctcgaaggaactgttcactgcactataccaggtactg
atcggaaagaatcaggggccacggcttgcgggtttcatgaaagtcatcggtacacagcgt
ttgcaccgcatgcttagcgtatactaa

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