Treponema pallidum subsp. pallidum Chicago: TPChic_0819
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Entry
TPChic_0819 CDS
T01868
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tph
Treponema pallidum subsp. pallidum Chicago
Brite
KEGG Orthology (KO) [BR:
tph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tph03016
]
TPChic_0819 (rnz)
Enzymes [BR:
tph01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
TPChic_0819 (rnz)
Transfer RNA biogenesis [BR:
tph03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
TPChic_0819 (rnz)
Prokaryotic type
TPChic_0819 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
DUF72
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ADD72909
LinkDB
All DBs
Position
complement(888317..889243)
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AA seq
308 aa
AA seq
DB search
MNLEAFILGCGGMVPLPHRHLTSVLLRREGELFLFDAGEGTQVSLRRLSLRWKKISAIFI
SHTHADHITGLPGLLMLSSQVARSEPLYIIGPPRTAEYVETSRRILDMYINYEIIVKEVI
EPQVVYRGKDFQVRCFCLDHTKPCMGYTLEEQDRPGSFDPRAAQDLHVPCGALWSQLQSG
VAVQSAQGVTVYPEQVMGPARPGRKVSFVTDTKYLQSIAAEVRNSDFFVCEGMFEKGMEK
DAAEKKHMTCVQAATIARDARVRLMALIHYSPRYTDHELKRLLKEAQRVFPHTILSRDQL
MVPIAYRE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaagcgtttattttagggtgtggcggcatggtgccattaccccatcggcat
ctgacttctgtgttgttgcgtcgtgagggagagttgtttctgttcgacgctggggaaggt
acccaagtgtcgttgcggcgtctgagcttacgctggaagaaaatcagtgccattttcatc
agtcacacccatgcagaccacatcactgggctgccggggcttttgatgctctcttctcaa
gttgctcgcagcgaaccgctgtacatcatcggtcctccaagaactgcagagtatgtggaa
acgagccgcaggattttggacatgtacattaattacgagattattgtcaaagaggtgata
gaaccacaagtggtataccgtggtaaggattttcaggtgcgctgtttttgtctggatcat
accaagccgtgtatgggctacacgctagaagagcaggatcgtcccggatcatttgacccg
cgcgcggctcaggatttgcacgttccctgtggggcgctgtggtctcagttacagtcaggg
gttgcagtgcagtccgcgcagggggtgacagtatatcctgaacaggtaatgggaccggcg
cgtccggggcgtaaggtgagcttcgtcactgatacaaaatatttgcagtccattgcagcc
gaggtgcggaattcggatttctttgtgtgtgagggaatgtttgagaaagggatggaaaag
gatgcagcagagaaaaagcatatgacgtgcgtgcaggcagccacgatagcgcgcgatgcg
cgtgtgcgacttatggcactcatccactatagccctcgatataccgatcacgagttgaaa
cgtttattaaaggaagcgcagcgtgttttcccgcacactattctgtctcgtgatcaattg
atggttcccattgcgtatcgagaatag
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