Treponema pallidum subsp. pallidum Chicago: TPChic_0886
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Entry
TPChic_0886 CDS
T01868
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tph
Treponema pallidum subsp. pallidum Chicago
Pathway
tph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TPChic_0886 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tph03019
]
TPChic_0886 (pnp)
03016 Transfer RNA biogenesis [BR:
tph03016
]
TPChic_0886 (pnp)
Enzymes [BR:
tph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TPChic_0886 (pnp)
Messenger RNA biogenesis [BR:
tph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TPChic_0886 (pnp)
Transfer RNA biogenesis [BR:
tph03016
]
Prokaryotic type
tRNA degradation factors
TPChic_0886 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
Motif
Other DBs
NCBI-ProteinID:
ADD72980
LinkDB
All DBs
Position
complement(964198..966306)
Genome browser
AA seq
702 aa
AA seq
DB search
MKHSITGTIGDHPLLLESGYLARQANGSVYLQCEGTAILATVCSSAQRQEGLDYVPLTVD
FNEKYYAVGKMPGGFIKREGRPKDREILISRLIDRPMRPLFEKEFGRDIHVVPTCISSDM
VHPHDVLAIVASSAAVTLSDIPFHGPVAAVRVAYLNGSYVINPTFSQIDAASMEVVVAGT
RQGITMVEGGAREVSEDLMLGALEQAQEHIKALCDMQERLRGLCGKEKQTVIPSSAQLVG
RDRIYELAYPRLAQALYAQGKGERRSACDAVKRDVAQQYAAQLENDVQRRLFDALFHEME
YEILRLNILDRGLRIDGRAIDAIRPIACEVGVLPRPHGSAVFTRGETQSLAVVTLGAMSD
GQVYDDIEGDRRENFILHYNFPPFSVGEIGRMGVGRREIGHGCLAHRSLSAVIPDPEQFP
YTVRVVSEILESNGSSSMATVCSGTLSLLHAGVPIKKPVAGIAMGLITDGVRYAILSDIL
GEEDHLGDMDFKVAGTCDGITGFQMDVKVEAVSASLMKEALQQARVGRLHILSVMNQTIS
APSVHISRYAPHIESFKIAVEKIGALIGPGGKTVKSLSDQYRVTINTDSDGTVTVSGRDA
QSVFDAKVAVVGLTEDPRVGRVYQGVVKRIVEFGAFVEIFPGKEGLCHVSKLSRSRVSKV
SDVLQEGQRICVKLIDIDRMGRLNLSYIDALEGKSGGLDTTK
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacagcataaccggcactattggggaccacccccttctccttgaaagtgggtat
ctggcgcggcaagcgaacgggtccgtgtatttacagtgtgaaggtacggcgattctcgcg
accgtatgctcctctgctcagcgacaggaagggctcgactatgtcccgctcactgttgac
ttcaacgaaaagtattatgcggtggggaagatgcctggcggcttcatcaagcgtgaaggc
cgtccgaaagacagagagattctcatttcgcgcctcattgatcgtccgatgcggccgctc
tttgaaaaggagtttggacgtgatatacacgttgtccctacgtgcatatcgtcggatatg
gtccatcctcatgacgtcttggctattgttgccagttcagctgccgttactctttcggat
atccccttccatggaccggttgctgcagtccgcgttgcatatctgaacggttcctatgtt
attaatcctaccttttctcagattgatgccgccagtatggaggttgtcgttgcaggcact
aggcagggcattaccatggtggaaggtggtgcgcgagaggtgtccgaggacctcatgctc
ggcgcgctcgaacaggcacaagagcatattaaagccctttgcgatatgcaggagcgtctg
cgtggactgtgtggcaaggagaaacagacggttatcccttcttctgcgcagcttgtaggt
cgcgatcgtatttatgagctcgcctatccgcgtcttgcgcaggctttgtatgcacagggg
aagggtgagcggcgcagtgcctgcgacgcggtgaagcgtgatgttgcacagcagtatgct
gctcagcttgagaacgatgtgcagcgcaggttgttcgacgcgttgttccacgagatggag
tatgagatactacggctgaacattcttgacaggggtttgcgcatcgatggccgtgccatt
gatgccattcggcccatcgcctgtgaggtcggggtgttgccgcgtccgcatgggtctgcg
gtgtttacccggggggagactcaatcgctcgcggtggtcacgctcggtgctatgtcggac
gggcaagtgtacgacgacatcgaaggggatagacgggagaattttatccttcactataat
tttcctcctttttcagtgggggaaatagggagaatgggggttggtcggagggagattggg
cacgggtgtctagcgcatcgttccctctcggcagtcattccggatccagaacagtttcct
tacaccgtgcgtgtggtttcagaaattttggagtcgaatggatcttcctccatggcgact
gtgtgctcagggacgctttctcttctccatgcaggggtcccaatcaaaaagcctgttgcg
ggaatcgcgatggggctcatcaccgatggcgtgcgatatgcgattctttcggatattttg
ggtgaggaggaccatctcggtgatatggatttcaaggtagcaggtacgtgtgacggcatt
accggttttcagatggatgtgaaggtagaggcggtgtctgcgtctctgatgaaggaggct
ttgcagcaagctcgtgtaggtaggctccatattctttctgtcatgaatcagacaatcagc
gcaccgagcgtgcacatttctcgctatgcgccgcatattgagagttttaaaatagcggtt
gaaaaaatcggcgcgctcatcggtcctggggggaaaaccgttaagtcgctttctgaccag
tatcgggtgactatcaacactgatagtgacggtaccgtaaccgtctccggaagggatgcg
cagtccgttttcgacgcaaaggtcgccgtggtgggccttactgaagatcctcgggtaggg
agggtgtatcagggtgtagtgaaacgaatcgtagagttcggtgcttttgtggagatcttt
ccagggaaggaaggactctgccacgtttcaaagctgtcgcgcagccgcgtgtccaaagtc
agcgatgtgctgcaagagggtcagcggatatgtgtgaagttgattgatatcgacaggatg
ggtcgtttgaatctttcctatatcgatgctcttgaggggaagtctggaggtctggacacg
acgaaatga
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