KEGG   Treponema pallidum subsp. pallidum Chicago: TPChic_0889
Entry
TPChic_0889       CDS       T01868                                 
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
tph  Treponema pallidum subsp. pallidum Chicago
Brite
KEGG Orthology (KO) [BR:tph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tph03016]
    TPChic_0889
Enzymes [BR:tph01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     TPChic_0889
Transfer RNA biogenesis [BR:tph03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    TPChic_0889
 Prokaryotic type
    TPChic_0889
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: ADD72983
LinkDB
Position
complement(967570..968655)
AA seq 361 aa
MPDAIVPFAKVSGLTSFAALAQVRRLLGVKKVGHTGTLDRFADGLLLLLVGGFTKLAPVM
TRLEKSYEARIQFGVQTDTLDPEGAVVRCSLFPTFARVRAALPHFTGSIDQVPPEYSALK
FGGVRASDRVRRGEAVCMKARRVFVFDLQVLGCEADLGEFKKTQAGRGAAIADLDLTRVR
AVTLYVRCSAGFYVRALARDIAAACGSCAYVSHLRRTRIGPFDLAQAAGVSRLGSWTWGK
ERASCGAACFDVGAPPPPSSGGVATDSVSFGCEDLTVREIKQAVVSCDVDFANRIGLTAC
SVHAQYASRFLHGERIRACWFQSFGTRRPGERALVFSEGRCLGLIRKAANGFSYDAVFCT
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcctgacgctattgttcctttcgcaaaggtttccggtcttacgagttttgcggcactg
gcacaggtcaggcgtcttctgggagtaaaaaaggtagggcatacggggacgcttgatcgc
tttgctgatgggctgctgttgcttttggtagggggctttaccaaactcgcgccggtgatg
actcgcttggaaaagagttacgaggctcgtatccagtttggggtacaaacagacactcta
gatccggagggggctgtcgtgcggtgctccttgttcccaacatttgcgcgcgtgcgtgcg
gcgctgcctcacttcactgggagtattgatcaggtgccgcctgaatattcggcgctaaaa
ttcggaggtgtgcgtgcgtccgaccgggtgcggcgtggggaagcagtgtgcatgaaggct
cggcgtgtgttcgtctttgacttgcaggtactaggttgcgaggcggatctgggtgaattc
aaaaagacgcaggcggggaggggggctgcgattgctgatcttgatctgacgcgcgtgcgt
gctgtaacgctgtacgtacgttgttcggcaggcttctacgtgcgtgcacttgcgcgcgac
atagcagccgcttgcggctcttgcgcgtatgtttcacatttacggagaacacgcattgga
ccctttgatcttgcacaggcggcgggtgtgtctcgtctcgggtcctggacatggggcaaa
gagcgtgcgtcttgcggtgccgcttgctttgatgtgggtgctccaccgcctccgtcctca
ggcggcgtggcgaccgattcagtctctttcgggtgtgaagacttgacggtgcgtgagatt
aagcaggcagtggttagctgtgatgtggactttgcgaatcgtattggacttacggcgtgt
tcagtgcatgcgcagtatgcgtcgcggtttttgcatggggaaagaatacgcgcatgttgg
ttccagtcgtttggtacgcgaaggcccggggaacgtgcgttggtgttttccgagggtcgc
tgtcttggattaataaggaaagcggcgaatgggttttcgtatgatgcggtattttgtacg
gagtga

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