Treponema pallidum subsp. pallidum Chicago: TPChic_1005
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Entry
TPChic_1005 CDS
T01868
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tph
Treponema pallidum subsp. pallidum Chicago
Pathway
tph03030
DNA replication
tph03430
Mismatch repair
tph03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TPChic_1005
03430 Mismatch repair
TPChic_1005
03440 Homologous recombination
TPChic_1005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tph03032
]
TPChic_1005
03400 DNA repair and recombination proteins [BR:
tph03400
]
TPChic_1005
Enzymes [BR:
tph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TPChic_1005
DNA replication proteins [BR:
tph03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TPChic_1005
DNA repair and recombination proteins [BR:
tph03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TPChic_1005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_5
AAA_22
Rad17
ResIII
AAA_16
AAA_18
AAA_19
TIP49
DUF7346
AAA_14
AAA_30
AAA_28
Sigma54_activ_2
RNA_helicase
TsaE
Herpes_Helicase
AAA_2
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ADD73097
LinkDB
All DBs
Position
complement(1094500..1096218)
Genome browser
AA seq
572 aa
AA seq
DB search
MAYQVTATRYRPQRFQHVLGQKFVVATLQKSLEENKVSPAYLFSGPHGCGKTSCARILAK
ALNCVQREASEPCGECPSCREIATGTNLNVIEIDGASHTGVGDVRQIKEEILFPPHGTRY
KVFIIDEVHMLSNSAFNALLKTIEEPPPYVVFIFATTEVHRIPATVKSRCQQFHFRLVDT
QTLVCALAQAAQQMQIAVEDGVLSWIARESAGSMRDAYTLFDQTVVSCAGPVTLENIQKK
LGLMTDDSLAALFSHCCRKDARAALELVDALVSSGVSVEQCVIDCVRYARALLLFTQGIT
NESLVGIAANQVPEYVRTTWNASQIERALGLLLQLFRDIRFSVDPRYELELAISRLAWLS
EYVSIQEVRVALDSVQQILDTHAVPGVCSASVGSDDGETGVVSPHGIRPPMSTSVCTVRA
LQDALVEKLRASHQMLATALGSSYSWREEDTSVCMCVRTHYERSVISQHASLLKEYASEL
LGREVCVRVLLDSVPSSKVAPSHLPQSPAPSALFTTSLLISGQECDRVSGDLPAQVKLLC
DCVQGHVVRVYEGTARCVPGEGKIAGAVRTPY
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtatcaagtgacggcaacacggtatcggccgcaacgttttcagcacgtgttgggt
cagaagtttgtagtggcaacactgcaaaaatctcttgaggagaacaaagtttctcctgcg
tatttgttttccggcccacatgggtgtggtaagaccagctgtgcgcgtatccttgcaaag
gcattgaattgtgtgcaaagagaagcgtctgaaccgtgtggagagtgtccgtcttgtaga
gagattgccaccggtactaatttaaatgttatcgaaattgacggtgcgtcacacacaggg
gtgggcgacgtacgtcagattaaggaagagattctctttccacctcatgggacgcgttac
aaggtttttattattgatgaggtgcatatgctttcaaacagtgcctttaatgcactgttg
aagacaatcgaagagcctccgccgtatgtggtatttatctttgcaacaacggaggtgcac
aggattcctgcaacggtaaaaagtcgctgtcaacaatttcattttcgtttggtagatact
cagacgcttgtttgtgcgttggcgcaagctgcccagcagatgcagattgcagttgaagac
ggagtactgtcttggattgcgcgtgagtcagccggtagcatgcgagacgcatatactttg
ttcgatcaaaccgtggtgtcttgcgcagggccggtaacacttgagaacattcaaaaaaaa
ctcgggctaatgactgacgactcacttgcagcactgttttcacattgctgccgcaaagat
gctcgcgccgccttggaattggtagatgctttggtaagttctggtgtctccgttgaacag
tgcgtaatcgactgtgtccgctatgcgcgtgcactgttgcttttcacgcagggaattaca
aatgagtcactggtaggaatagcggcaaaccaagtgcctgagtacgtgcgtaccacatgg
aatgcgtcgcagattgagcgggcgcttggactgttactgcaactgtttcgcgacattcgt
ttttcagtagatccgcggtatgaattggagctcgcaatttcgcgtttagcgtggttgagt
gagtatgtctcaattcaagaagtacgcgttgcattggatagtgtgcagcagatactggac
acgcatgcagttcccggggtgtgttctgcgtctgtaggttcggacgatggggaaacaggt
gtcgtctccccacacggtatacgtccccctatgtcaacatcagtatgtaccgtgcgtgcg
ttacaagatgccttggtagaaaagttgcgcgcgtcacaccagatgttggcaacagcgctt
ggttcttcatattcttggcgcgaggaagatacttctgtgtgcatgtgcgtacgcacgcat
tatgagcgcagcgttatctctcagcacgcgtcgctgctcaaggagtatgcgtcagaatta
ctgggacgggaggtatgcgttcgcgtacttctggattcggtgccttcgtcaaaagtcgcg
ccctcccatcttcctcagagtcctgccccatctgctctctttacaacttctttgcttatc
tctgggcaggagtgtgatagggtgagtggagatctgcctgcacaggtgaagcttctctgt
gattgtgtgcaagggcacgtggtgcgtgtgtatgaaggtactgcacggtgtgtacctggg
gaggggaaaatagcaggggctgtgcgtactccgtattga
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