Treponema pallidum subsp. pallidum Chicago: TPChic_1006
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Entry
TPChic_1006 CDS
T01868
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tph
Treponema pallidum subsp. pallidum Chicago
Brite
KEGG Orthology (KO) [BR:
tph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tph03032
]
TPChic_1006 (gyrB)
03400 DNA repair and recombination proteins [BR:
tph03400
]
TPChic_1006 (gyrB)
Enzymes [BR:
tph01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TPChic_1006 (gyrB)
DNA replication proteins [BR:
tph03032
]
Prokaryotic type
DNA Topoisomerases
TPChic_1006 (gyrB)
DNA repair and recombination proteins [BR:
tph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TPChic_1006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADD73098
LinkDB
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Position
complement(1096277..1098190)
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AA seq
637 aa
AA seq
DB search
MGIEYSASSITVLEGLEAVRKRPGMYIGSTGPNGLHHLVYEVVDNCIDEAMAGYCDRITV
VLEQGNVVRVEDNGRGIPVDVHPHEGVSALEVVLTKLHAGGKFDKKSYKVSGGLHGVGVS
VVNALSLWVEVTVYRDGAEYYQKFNVGMPLAPVEKRGVSEKRGTIIRWQADPSIFKETVA
YDFDVLLTRLRELAFLNSTVVIQLRDERLATAKQVEFAFEGGIRHFVSYLNRGKSVVPER
PLYIEGSKSDVLVEVALQYHDGYTENVQSFVNDINTREGGTHLEGFKSALTRVANDFLKK
SPKLAKKIEREEKLVGEDVRAGLTVVLSVKIPEPQFEGQTKTKLGNSEVRGIVDSLVGER
LTLYFEQNPGVLTKILEKSIAEAQARLAARRAKEAARRKSGMDSFGLPGKLADCSLKDPA
KCEVYIVEGDSAGGSAKKGRDSKTQAILPLWGKMLNVEKTRLDKVLHNEKLQPIIATLGT
GVGKDFDLTRIRYHKVIIMADADVDGSHIRTLLLTFFFRYLPQIIEAGYVYLAMPPLYRI
AWSKKELYVYSDTERDEALESIGKKSGVAVQRYKGLGEMDGTQLWETTMNPVRRKMMQVV
LSDAVEADRVFSTLMGEDVEPRRKFIEENAIYARLDV
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggggattgagtactcagcgagtagcattactgtattggaaggtcttgaagcggtacgc
aagcgtccggggatgtatatcggctctaccggtcctaatggattgcaccatctggtgtac
gaggtggtggataactgtatcgatgaagccatggctgggtactgtgatcgtatcaccgtg
gtgctcgaacaaggaaacgtcgtgcgtgttgaagacaacgggcgaggtattcctgttgac
gtgcaccctcatgagggggttagtgcgcttgaggttgtacttactaagttacatgcgggg
gggaagtttgacaagaaatcgtataaggtgtcgggtggactccacggagttggagtttct
gtggtcaacgcgctgtcgttgtgggtagaagtgacagtgtatcgtgatggtgctgagtat
tatcagaagtttaatgtggggatgccgcttgctccagtagagaagcggggagtgtcggaa
aaacgtggcactattatccgctggcaggcggacccatccattttcaaagaaacggtggcc
tatgattttgacgtactcctgacgcgtttgcgtgaacttgcttttttgaatagcacggta
gttattcagttgcgtgatgagcggttggcgaccgctaaacaggttgaatttgcgttcgaa
ggaggtattcgtcattttgtcagttatttaaaccgcggtaaatcagttgtgcccgaacgt
cctctgtacattgagggatcgaagtcggatgttttagtggaagttgcgttgcaatatcac
gatggttatacggaaaacgtgcagtcatttgtcaatgatattaatacccgtgaggggggc
acgcatcttgaaggatttaagtcggcacttacgcgtgtggcgaacgattttttgaaaaaa
agtccaaagcttgcaaagaagatagaaagggaagaaaagctcgttggggaagatgtgcgt
gctggattgacagtggtgctttctgtgaaaattcctgaaccccagtttgaagggcagaca
aagacgaagttgggaaacagtgaggtgcggggtattgttgattctttggtgggggagcgt
ctgacgctctattttgagcaaaatccaggtgtgcttacaaagattcttgaaaagagcatt
gcagaggcgcaggcgcgtcttgcagcacgtcgtgcaaaggaagctgcgcgcagaaaaagt
ggaatggatagttttgggttgccgggaaagttggccgactgttcgctcaaggatccggcg
aagtgcgaagtatatattgtggaaggggattctgcaggaggttcggcgaaaaaaggacgg
gacagcaagacacaggccattttgcctttgtgggggaagatgctgaacgtggaaaagaca
cgtttggataaggtcttgcataacgaaaaattacagccaattatcgcaacgctcggtaca
ggtgttggcaaggattttgatttaacaaggattcgctatcataaagtgatcatcatggcg
gatgcggacgtggatggctctcacatccgtacgcttcttttaacgttcttctttcgatac
ctgccgcaaataattgaagctggttacgtatatcttgcgatgccgcctttgtatcgcatt
gcgtggagtaaaaaggaactgtatgtgtatagcgacacagagcgtgacgaagcgctagaa
agtatcggtaaaaaaagtggtgtcgctgtgcagcgttataaaggtctgggggaaatggat
ggcactcagctttgggagacaactatgaatccagtgcgtcgcaagatgatgcaggtggtg
ctctcagatgcggtggaagcagaccgggtgtttagtactctcatgggtgaagatgtcgaa
ccgcgccgtaagtttattgaagagaatgcaatatatgcgcgtttggacgtatga
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