Treponema phagedenis: FUT81_00380
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Entry
FUT81_00380 CDS
T06342
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tphg
Treponema phagedenis
Brite
KEGG Orthology (KO) [BR:
tphg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tphg03400
]
FUT81_00380
DNA repair and recombination proteins [BR:
tphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FUT81_00380
Archaeal homologous recombinant proteins
FUT81_00380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
DUF4125
Motif
Other DBs
NCBI-ProteinID:
QEK08033
LinkDB
All DBs
Position
103719..104894
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AA seq
391 aa
AA seq
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MKILHTADLHLGKSLHEFSLYEQQKKMLHDIRQILSKDDYAAFCIAGDVYDRSIPPADSV
SLFSSFLTEIKADNPELSIYIIPGNHDSAQRLSFASELLKGQNIFIHQDPEKSDLPYHIS
HNGEEAAVFLLPFLNLGAFSYIAEDKTEKLMTSQSEMLTEASRRLKKTVPKNMPSILIAH
LFTLAGKSSSSERVFVGLAEQVDPALFDFFSYAALGHLHKPQKITKRMYYSGAPLPYSFD
EADDRKSVLSVDIDCKTEGFPVTVTEIPIAPLIPLRRLEGTFEEFHRGSKFAAYENDFLE
IQLTDSLTVANPMGLLKTRYPRIMNIKQPQVFFQTDEKTNGSSLRGRKLSANDPQTLMQN
FQAFQKEIESDASPEKKEVFTLLCKQIQEER
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgcatactgcggacttacatttagggaaatccttgcatgaattctctctt
tatgagcagcaaaaaaaaatgctgcatgatatacggcaaatcctttcaaaagatgactat
gccgctttttgtattgcgggcgatgtgtacgaccgctccattcctcccgccgattcggta
agtttgttcagctcttttttaaccgagataaaggcggataatccggaactttctatttat
attattccgggcaatcacgattctgcgcagcggctttcttttgcaagtgagctgctgaaa
gggcaaaatatttttattcaccaagaccccgaaaaatccgatttgccctatcatatttcg
cataacggagaagaagcagctgtttttttgcttccttttttaaatttgggagcattttca
tatattgccgaagacaaaaccgaaaagcttatgacttcgcaatcggaaatgcttaccgaa
gcgtctcggcggctaaaaaaaacggtaccgaaaaatatgccgtctattcttattgcccac
ctttttacgcttgcgggaaaatcttcttcaagtgagcgcgtttttgtcggtttggccgaa
caggttgaccccgctctttttgactttttctcttatgcggcactcgggcatttgcataag
ccgcaaaaaataacgaagcgaatgtattactccggcgctccgcttccgtactcatttgat
gaagcggacgaccgcaagtcggtgttatccgtagatattgactgcaaaacggaaggcttt
ccggtaaccgttaccgaaattccgattgcgcctcttatccccctgcggcggcttgagggt
acatttgaagaattccatcggggcagcaagtttgccgcatatgaaaatgattttcttgaa
attcagcttacagattctttgacagtggcaaatccaatgggtttgttaaaaacccgttat
ccgcgcattatgaatattaagcagccgcaagtcttttttcagaccgacgaaaaaacgaac
ggcagctcattgcgggggcgaaaattgagcgcaaatgacccgcaaacacttatgcaaaat
ttccaagcttttcaaaaagagattgaaagcgatgcaagtcccgaaaaaaaagaagtgttt
acgcttctttgcaaacaaatacaagaggagcggtaa
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